MARINE MAMMAL RESEARCH UNIT - UBC

Andrew W. Trites

Director, Marine Mammal Research Unit
Professor, Institute for the Oceans and Fisheries

Tel: 604.822.8182
Fax: 604.822.8180
E-mail: a.trites@oceans.ubc.ca

Education: BSc Mathematics & Ecology (McGill University);  MSc Zoology (UBC); PhD Zoology (UBC)

Research Interests: biology of marine mammals, population dynamics, bioenergetics, fisheries, data analysis

Education: BSc Mathematics & Ecology (McGill University);   MSc Zoology (UBC); PhD Zoology (UBC)

Courses Taught: Fish 506 – Critical Issues in Fisheries;  Mar. Sci. 455 – Biology of Marine Mammals; Scie 300 – Communicating Science; Biol 140 – Laboratory Investigations in Life Science

Professional Credentials:

Professor UBC Institute for the Oceans and Fisheries
Director UBC Marine Mammal Research Unit
 Associate Member  UBC Department of Zoology
Research Associate Vancouver Aquarium Marine Science Centre
Governors’ Council Ocean Wise
Member PICES Advisory Panel on Marine Birds and Mammals
Member Marine Mammal Specialist Group for the Committee on the Status of Endangered Wildlife in Canada (COSEWIC)


 

 

Research

My research is primarily focussed on pinnipeds (Steller sea lions, northern fur seals, and harbor seals) and involves captive studies, field studies and simulation models that range from single species to whole ecosystems. My research program is designed to further the conservation and understanding of marine mammals, and resolve conflicts between people and marine mammals. I oversee a research program that includes researchers, students, technicians and support staff. The training of students, and the collaboration between researchers specializing in other disciplines (such as nutrition, ecology, physiology and oceanography) is central to the success of my research program.

Current and Recent Projects:

Steller sea lions

Steller sea lion count
Counting Steller sea lions at a haulout

The disappearance of Steller sea lions from the Gulf of Alaska and Aleutian Islands since the mid 1970s is a major ecological mystery. We have tried to test all of the major hypotheses. Predation by killer whales, competition with fisheries, and reproductive failure associated with consuming large amounts of low energy fish (e.g., pollock or Pacific cod) have not yet been refuted. We continue to test these three leading hypotheses using a combination of field studies, captive experiments and retrospective modelling and data analysis.


 

 

Gluing a GPS-tracking tag to the fur

Northern fur seals

The cause of the Steller sea lion decline may be linked to the dramatic fall of northern fur seals on the Pribilof Islands. In addition to studying a captive colony of fur seals at the Vancouver Aquarium, we have conducted research on Bogoslof Island and the Pribilof Islands to assess whether fur seals are experiencing food shortages that could be caused by fishing or natural changes in the ecosystem. The studies have included fine scale foraging, dietary differences, and changes in body size.


 

 

Harbour seals

harbour seals
Harbour seal mother and pup

Harbour seals have been implicated in the decline of sockeye, chinook and coho salmon in British Columbia. Harbour seals in the Strait of Georgia have recovered from culling and are the highest density population of harbour seals found anywhere in the world. Some of our research is focused on diets and foraging behavior of seals in the Strait of Georgia and the effects that predation are having on the lack of recovery of commercially important fish species. Research involves a combination of field and mathematical modelling studies.


 

 

Killer whales

Models, data analysis, and field studies are underway to determine whether the decline of southern resident killer whales is due to a lack of Chinook salmon in the Salish Sea. It involves using biologgers to assess the movements of individual killer whales, and using hydroacoustics to determine the abundance and distribution of prey. Other research is assessing the importance of the Salish Sea to transient (Bigg’s) killer whales that prey on seals, sea lions and small cetaceans.


 

 

Food consumption of marine mammals 

“How much food do marine mammals consume?” is a question we are attempting to answer using generalized models of food consumption we have derived for all species of marine mammals according to whether they have low, medium or high costs of living. The models are being applied to the North Pacific for comparison with commercial fish catches.


 

 

Graduate Student Opportunities

I generally accept one to two students per year through the Institute for the Oceans and Fisheries, Department of Zoology, or Institute for Resources, Environment and Sustainability. Current thesis topics are described in the graduate student homepages, and completed theses are listed below. Research topics have spanned the fields of animal behavior, physiology, molecular ecology, biomechanics, ecosystem modelling, habitat modelling, population dynamics, and predator-prey interactions.

University of British Columbia    Vancouver Aquarium

INSTITUTE FOR THE OCEANS and FISHERIES

 

 

 

PUBLICATIONS BY ANDREW W. TRITES


(in press)
 
Using biologging tags to quantify gray whale foraging behavior.
Colson, K. M., E. Pirotta, L. New, D. E. Cade, J. Calambokidis, K. C. Bierlich, C. N. Bird, A. F. Ajo, L. Hildebrand, A. W. Trites and L. G. Torres. (in press).
Marine Mammal Science
abstract
High-resolution tri-axial accelerometry biologging tags have quantitatively described behaviors in baleen whale species that forage using lunges and continuous ram filtration. However, detailed quantitative descriptions of foraging behaviors do not exist for gray whales, a unique baleen whale species that primarily uses benthic suction feeding with a rolling component. We deployed suction cup biologging tags on Pacific Coast Feeding Group (PCFG) gray whales to quantify foraging behavior at the broad state (dive) and foraging tactic (roll event) scales. Hidden Markov Models were used to describe three distinct states using turn angle, dive duration, pseudotrack tortuosity, and presence of roll events that can be interpreted as forage, search, and transit behavior. Classification and Regression Tree models best described foraging tactics (headstands, benthic digs, and side swims) using median pitch, depth to total length ratio, and absolute value of the median roll. On average, PCFG gray whales spent more time searching and performed more left-rolled foraging tactics at shallower depths at night compared to during the day, potentially to track prey above them in the water column. Describing foraging behavior in PCFG gray whales enables examination of links between behavioral budgets, energetics, and the physiological impact of threats facing this group.
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Variance-reduced stochastic optimization for efficient inference of hidden Markov models.
Sidrow, E., N. Heckman, A. Bouchard-Côté, S. M. E. Fortune, A. W. Trites and M. Auger-Méthé. (in press).
Journal of Computational and Graphical Statistics
abstract
Hidden Markov models (HMMs) are popular models to identify a finite number of latent states from sequential data. However, fitting them to large data sets can be computationally demanding because most likelihood maximization techniques require iterating through the entire underlying data set for every parameter update. We propose a novel optimization algorithm that updates the parameters of an HMM without iterating through the entire data set. Namely, we combine a partial E step with variance-reduced stochastic optimization within the M step. We prove the algorithm converges under certain regularity conditions. Using simulations and a case study of kinematic data from eight killer whales (Orcinus orca) off the western coast of Canada, we show that our algorithm converges in fewer epochs and to regions of higher likelihood compared to standard numerical optimization techniques. Our algorithm allows practitioners to fit complicated HMMs to large time-series data sets more efficiently than existing baselines.
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2024
 
Chinook salmon depth distributions on the continental shelf are shaped by interactions between location, season, and individual condition.
Freshwater, C., S. C. Anderson, D. D. Huff, J. Smith, D. Jackson, B. Hendriks, S. G. Hinch, S. Johnston, A. W. Trites and J. King. 2024.
Movement Ecology 12:21
abstract
Ecological and physical conditions vary with depth in aquatic ecosystems, resulting in gradients of habitat suitability. Although variation in vertical distributions among individuals provides evidence of habitat selection, it has been challenging to disentangle how processes at multiple spatio-temporal scales shape behaviour. We collected thousands of observations of depth from > 300 acoustically tagged adult Chinook salmon Oncorhynchus tshawytscha, spanning multiple seasons and years. We used these data to parameterize a machine-learning model to disentangle the influence of spatial, temporal, and dynamic oceanographic variables while accounting for differences in individual condition and maturation stage. The top performing machine learning model used bathymetric depth ratio (i.e., individual depth relative to seafloor depth) as a response. We found that bathymetry, season, maturation stage, and spatial location most strongly influenced Chinook salmon depth. Chinook salmon bathymetric depth ratios were deepest in shallow water, during winter, and for immature individuals. We also identified non-linear interactions among covariates, resulting in spatially-varying effects of zooplankton concentration, lunar cycle, temperature and oxygen concentration. Our results suggest Chinook salmon vertical habitat use is a function of ecological interactions, not physiological constraints. Temporal and spatial variation in depth distributions could be used to guide management decisions intended to reduce fishery impacts on Chinook salmon. More generally, our findings demonstrate how complex interactions among bathymetry, seasonality, location, and life history stage regulate vertical habitat selection.  
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Foraging behaviour and ecology of transient killer whales within a deep submarine canyon system.
McInnes, J. D., K. M. Lester, L. M. Dill, C. R. Mathieson, P. J. West-Stap, S. L. Marcos and A. W. Trites. 2024.
PLoS ONE Vol 19(3):e0299291.
abstract
Transient killer whales have been documented hunting marine mammals across a variety of habitats. However, relatively little has been reported about their predatory behaviours near deep submarine canyons and oceanic environments. We used a long-term database of sightings and encounters with these predators in and around the Monterey Submarine Canyon, California to describe foraging behaviour, diet, seasonal occurrence, and habitat use patterns. Transient killer whales belonging to the outer coast subpopulation were observed within the study area 261 times from 2006–2021. Occurrences, behaviours, and group sizes all varied seasonally, with more encounters occurring in the spring as grey whales migrated northward from their breeding and calving lagoons in Mexico (March-May). Groups of killer whales foraged exclusively in open water, with individuals within the groups following the contours of the submarine canyon as they searched for prey. Focal follows revealed that killer whales spent 51% of their time searching for prey (26% of their time along the shelf-break and upper slope of the canyon, and 25% in open water). The remainder of their time was spent pursuing prey (10%), feeding (23%), travelling (9%), socializing (6%), and resting (1%). Prey species during 87 observed predation events included California sea lions, grey whale calves, northern elephant seals, minke whales, common dolphins, Pacific white-sided dolphins, Dall’s porpoise, harbour porpoise, harbour seals, and sea birds. The calculated kill rates (based on 270 hours of observing 50 predation events) were 0.26 California sea lions per killer whale over 24 hours, 0.11 grey whale calves, and 0.15 for all remaining prey species combined. These behavioural observations provide insights into predator-prey interactions among apex predators over submarine canyons and deep pelagic environments.
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Evidence for an oceanic population of killer whales (Orcinus orcas) in offshore waters of California and Oregon.
McInnes, J. D., A. W. Trites, C. R. Mathieson, M. E. Dahlheim, J. E. Moore, P. A. Olson and K. M. Lester. 2024.
Aquatic Mammals 50:90-106.
abstract
In the northeastern Pacific, sightings of small numbers of killer whales of unknown ecotype have been sporadically reported during open ocean marine mammal surveys, pelagic birding expeditions, and high seas fishing operations. However, it is unknown whether these oceanic killer whales belong to a mammal-eating ecotype of killer whale, an offshore fish-eating ecotype, or an offshore generalist type. We attempted to determine the ecotype of 49 unknown individuals observed during 9 encounters from 1997-2021 in the deep oceanic waters far from the coastlines of California and Oregon (>65 km) based on their foraging behaviors, prey species consumed, morphologies, and the prevalence of cookiecutter shark bite scars. We hypothesize that these killer whales may represent a distinct oceanic subpopulation of transient killer whales or an undescribed oceanic population that feeds on marine mammals and sea turtles in the oceanic open ocean waters beyond the continental shelf break.
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Killer whale respiration rates.
McRae, T. M., B. L. Volpov, E. Sidrow, S. M. E. Fortune, M. Auger-Méthé, N. Heckman and A. W. Trites. 2024.
PLoS ONE 19(5):e0302758
abstract
Measuring breathing rates is a means by which oxygen intake and metabolic rates can be estimated to determine food requirements and energy expenditure of killer whales (Orcinus orca) and other cetaceans. This relatively simple measure also allows the energetic consequences of environmental stressors to cetaceans to be understood, but requires knowing respiration rates while they are engaged in different behaviours such as resting, travelling and foraging. We calculated respiration rates for different behavioural states of southern and northern resident killer whales using video from UAV drones and concurrent biologging data from animal-borne tags. Behavioural states of dive tracks were predicted using hierarchical hidden Markov models (HHMM) parameterized with time-depth data and with labeled tracks of drone-identified behavioural states (from drone footage that overlapped with the time-depth data). Dive tracks were sequences of dives and surface intervals lasting ≥ 10 minutes cumulative duration. We estimated respiration rates and calculated oxygen consumption rates for the predicted behavioural states of the tracks. We found that juvenile killer whales breathed at a higher rate when travelling (1.6 breaths min-1) compared to resting (1.2) and foraging (1.5)—and that adult males breathed at a higher rate when travelling (1.8) compared to both foraging (1.7) and resting (1.3). The juveniles in our study consumed 2.5–18.3 L O2 min-1 compared with 14.3–59.8 L O2 min-1 for adult males across all behaviours based on estimates of mass-specific tidal volume and oxygen extraction. Our findings confirm that killer whales take single breaths between dives and indicate that energy expenditure derived from respirations requires using sex, age, and behavioural-specific respiration rates. These findings can be applied to bioenergetics models on a behavioural-specific basis, and contribute towards obtaining better predictions of dive behaviours, energy expenditure and the food requirements of apex predators.
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Quantifying impacts of harbor seal Phoca vitulina predation on juvenile coho salmon in the Strait of Georgia, British Columbia.
Nelson, B. W., M. K. McAllister, A. C. Thomas, A. W. Trites and C. J. Walters. 2024.
Marine and Coastal Fisheries 16:e10271.
abstract
Coho Salmon Oncorhynchus kisutch provide an important resource for recreational, commercial, and Indigenous fisheries in the Pacific Northwest. The goal of this study was to improve our understanding of how marine mam-mal predation may be impacting the survival and productivity of Coho Salmon in the Strait of Georgia, British Columbia. Specifically, we quantified the impact of harbor seal Phoca vitulina predation on juvenile Coho Salmon during their first several months at sea. Early marine survival is believed to be the limiting factor for the recovery of Coho Salmon populations in this region. To estimate the number of juvenile Coho Salmon consumed by harbor seals, we developed a mathematical model that integrates predator diet data and salmon population and mortality dynamics. Our analysis estimated that harbor seals consumed an annual average of 46−59% of juvenile Coho Salmon between 2004–2016, providing the first quantitative estimate of seal predation in the Strait of Georgia. Marine mammal predation on juvenile Coho Salmon is potentially a very important factor limiting survival and recovery of Coho Salmon in the Strait of Georgia.
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Aquaculture related humpback whale entanglements in coastal waters of British Columbia from 2008–2021.
Storlund, R. L., P. E. Cottrell, B. Cottrell, M. Roth, T. Lehnhart, H. Snyman, A. W. Trites and S. A. Raverty. 2024.
PLoS ONE 19(3):e0297768.
abstract
Over the past two decades, increasing numbers of humpback whales have been returning to feed in the inshore waters of British Columbia (BC) where marine aquaculture farms are situated. This has led to growing concerns that the presence of aquaculture farms may pose an entanglement threat to humpback whales. However, it is not known whether aquaculture facilities attract humpback whales, or whether there are factors that increase the likelihood of humpback whale, becoming entangled and dying. We examined eight reports of hump-back whales interacting with Atlantic salmon farms in BC from 2008 to 2021 to evaluate the conditions that may have contributed to their entanglements. Of the eight entangled hump-backs, three individuals died and five were successfully disentangled and released. All were young animals (1 calf, 7 subadults). Multiple factors were associated with two or more of the reported incidents. These included facility design, environmental features, seasonality, humpback whale age, and feeding behaviour. We found that humpback whales were most commonly entrapped in the predator nets of the aquaculture facilities (6/8 incidents), and were less often entangled in anchor support lines (2/8). The presence of salmon smolts did not appear to be an attractant for humpback whales given that half of the reported entanglements (4/8) occurred at fallowed salmon farms. Almost all of the entanglements (7/8) occurred in late winter (prior to the seasonal return of humpbacks) and during late fall (after most humpbacks have migrated south). Overall, the number of humpback whales impacted
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Ultrasound images of the ascending aorta of anaesthetized northern fur seals and Steller sea lions confirm that the aortic bulb maintains continuous blood flow.
Storlund, R. L., D. A. S. Rosen, M. Haulena, S. Sanatani, J. Vander Zaag and A. W. Trites. 2024.
Journal of Experimental Zoology A: Ecological and Integrative Physiology DOI 10.1002/jez.2799:1-12
abstract
The increased size and enhanced compliance of the aortic bulb—the enlargement of the ascending aorta—are believed to maintain blood flow in pinnipeds during extended periods of diastole induced by diving bradycardia. The aortic bulb has been described ex vivo in several species of pinnipeds, but in vivo measurements are needed to investigate the relationship between structure and function. We obtained ultrasound images using electrocardiogramgated transesophageal echocardiography during anesthesia and after atropine administration to assess the relationship between aortic bulb anatomy and cardiac function (heart rate, stroke volume, cardiac output) in northern fur seals (Callorhinus ursinus) and Steller sea lions (Eumetopias jubatus). We observed that the aortic bulb in northern fur seals and Steller sea lions expands during systole and recoils over the entire diastolic period indicating that blood flow is maintained throughout the entire cardiac cycle as expected. The stroke volumes we measured in the fur seals and sea lions fit the values predicted based on body size in mammals and did not change with increased heart rates, suggesting that greater stroke volumes are not needed for aortic bulb function. Overall, our results suggest that peripheral vasoconstriction during diving is sufficient to modulate the volume of blood in the aortic bulb to ensure that flow lasts over the entire diastolic period. These results indicate that the shift of blood into the aortic bulb of pinnipeds is a fundamental mechanism caused by vasoconstriction while diving, highlighting the importance of this unique anatomical adaptation.
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Pinnipeds with proportionally wider aortic bulbs make longer dives.
Storlund, R. L., D. A. S. Rosen and A. W. Trites. 2024.
Marine Mammal Science e13145
abstract
The enlarged size of the aortic bulb is thought to enhance the ability of marine mammals to remain underwater for extended periods. However, a convincing link between aortic bulb size and diving capacity has not been established. Using new and existing data, we examined the relationships between body size, maximum and routine dive duration, and aortic bulb size of pinnipeds. Comparisons among seven species of pinnipeds showed that the diameter of the aortic bulb increases allometrically with body mass (aortic bulb diameter = 0.58 x body mass0.41). We also found a linear relationship between routine dive duration and relative aortic bulb diameter (routine dive duration = 0.20 x relative aortic bulb diameter – 3.30), but no apparent relationship with maximum dive duration. Our results indicate that relative aortic bulb diameter influences diving capacity, providing further evidence that the aortic bulb is an adaptation to diving. Specifically, the relative diameter of the aortic bulb partially determines how long pinnipeds can routinely remain underwater. This has implications for the ability of different species of marine mammals to adapt to projected environmental changes and effectively forage or evade threats in altered habitats.
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2023
 
A review of recent and future marine extinctions.
del Monte-Luna, P., M. Nakamura, A. Vicente, L.B. Pérez-Sosa, A. Yáñez-Arenas, A.W. Trites and S.E. Lluch-Cota. 2023.
Cambridge Prisms: Extinction 1(e13):1-9.
abstract
Between 20 and 24 marine extinctions, ranging from algal to mammal species, have occurred over the past 500 years. These relatively low numbers question whether the sixth mass extinction that is underway on land is also occurring in the ocean. There is, however, increasing evidence of worldwide losses of marine populations that may foretell a wave of oncoming marine extinctions. A review of current methods being used to determine the loss of biodiversity from the world’s oceans reveals the need to develop and apply new assessment methodologies that incorporate standardized metrics that allow comparisons to be made among different regions and taxonomic groups, and between current extinctions and past mass extinction events. Such efforts will contribute to a better understanding of extinction risk facing marine flora and fauna, as well as the ways in which it can be mitigated.

keywords     Biodiversity loss; sixth mass extinction; overfishing; extirpation; extinction risk
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Year-round foraging across large spatial scales suggest that bowhead whales have the potential to adapt to climate change.
Fortune, S.M.E., A.W. Trites, V. LeMay, M.F. Baumgartner and S.H. and Ferguson. 2023.
Frontiers in Marine Science 9:529-551.
abstract
The ecological impact of environmental changes at high latitudes (e.g., increasing temperature, and decreased sea ice cover) on low-trophic species, such as bowhead whales, are poorly understood. Key to understanding the vulnerability of zooplanktivorous predators to climatic shifts in prey is knowing whether they can make behavioural or distributional adjustments to maintain sufficient prey acquisition rates. However, little is known about how foraging behaviour and associated environmental conditions fluctuate over space and time. We collected long-term movement (average satellite transmission days were 397 (±204 SD) in 2012 and 484 (±245 SD) in 2013) and dive behaviour data for 25 bowhead whales equipped with time-depth telemetry tags, and used hierarchical switching-state-space models to quantify their movements and behaviours (resident and transit). We examined trends in inferred two-dimensional foraging behaviours based on dive shape of Eastern Canada-West Greenland bowhead whales in relation to season and sea ice, as well as animal sex and age via size. We found no differences with regards to whale sex and size, but we did find evidence that subsurface foraging occurs year-round, with peak feeding occurring in fall (7.3 hrs d-1 ± 5.70 SD; October) and reduced feeding during spring (2.7 hrs d-1 ± 2.55 SD; May). Although sea ice cover is lowest during summer foraging, whales selected areas with 65% (± 36.1 SD) sea ice cover. During winter, bowheads occurred in areas with 90% (± 15.5 SD) ice cover, providing some open water for breathing. The depth of probable foraging varied across seasons with animals conducting epipelagic foraging dives (< 200 m) during spring and summer, and deeper mesopelagic dives (> 400 m) during fall and winter that approached the sea bottom, following the seasonal vertical migration of lipid-rich zooplankton. Our findings suggest that, compared to related species (e.g., right whales), bowheads feed at relatively low rates and over a large geographic area throughout the year. This suggests that bowhead whales have the potential to adjust their behaviours and shift their distributions to adapt to climate-change induced environmental conditions. However, the extent to which energetic consumption may vary seasonally is yet to be determined.
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Comparing lethal and non‐lethal methods of active population control for harbor seals in British Columbia.
Nelson, B.W., C.J. Walters, A.W. Trites and M.K. McAllister. 2023.
The Journal of Wildlife Management Vol e22400
abstract
Pinniped populations around the world increased rapidly after hunting and culling during the nineteenth and twentieth centuries ended. Some believe that pinnipeds are now preventing the recovery of certain fish populations, and that controlling pinniped population abundance using lethal measures such as harvesting or by non‐lethal means like contraception could recover fish populations. It is unclear, however, how effective and how long it would take for such methods of population control to bring numbers of pinnipeds down to target levels. We used sex‐ and age‐structured population models to estimate how quickly harbor seal (Phoca vitulina) abundance in British Columbia, Canada, could be reduced by 50%, through combinations of lethal removals and sterilization of adult females. Models were fit to seal abundance, demographic, and harvest data collected between 1879 and 2014. Simulation modeling suggests reliance on contraception exclusively is unlikely to reduce the current harbor seal population (numbering ~100,000) by 50% within 25 years, and would result in more variable outcomes, compared to lethal removals. Contraception could be combined with harvesting to maintain a target abundance of harbor seals (although captive studies with harbor seals are needed to confirm the efficacy of contraception). Our simulation modeling approach provides a useful framework to assess how non‐lethal measures could be integrated into policies that promote active population control of harbor seal numbers.

keywords     British Columbia, harbor seal, integrated population model, population control, sterilization
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An integrated system to assess marine extinctions.
Yáñez-Arenas, A., M. Nakamura, A.W. Trites, H. Reyes-Bonilla, C.J. Hernández-Camacho, F. Galván-Magaña, J. Borcherding and P. del Monte-Luna. 2023.
PLoS ONE Vol 18:e0293478.
abstract
More than 20 global marine extinctions and over 700 local extinctions have reportedly occurred during the past 500 years. However, available methods to determine how many of these species can be confidently declared true disappearances tend to be data-demanding, time-consuming, and not applicable to all taxonomic groups or scales of marine extinctions (global [G] and local [L]). We developed an integrated system to assess marine extinctions (ISAME) that can be applied to any taxonomic group at any geographic scale. We applied the ISAME method to 10 case studies to illustrate the possible ways in which the extinction status of marine species can be categorized as unverified, possibly extinct, or extinct. Of the 10 case studies we assessed, the ISAME method concludes that 6 should be categorized as unverified extinctions due to problems with species’ identity and lack of reliable evidence supporting their disappearance (periwinkle—Littoraria flammea [G], houting—Coregonus oxyrinchus [G], long-spined urchin—Diadema antillarum [L], smalltooth sawfish—Pristis pectinata [L], and largetooth sawfish—P. pristis [L]). In contrast, ISAME classified the Guadalupe storm-petrel (Oceanodroma macrodactyla [G]) and the lost shark (Carcharhinus obsolerus [G]) as possibly extinct because the available evidence indicates that their extinction is plausible—while the largetooth sawfish [L] and Steller’s sea cow (Hydrodamalis gigas [G]) were confirmed to be extinct. Determining whether a marine population or species is actually extinct or still extant is needed to guide conservation efforts and prevent further bio-diversity losses.
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2022
 
New colony of Guadalupe fur seals (Arctocephalus townsendi) discovered on El Farallón de San Ignacio Island, Gulf of California.
del Carmen, G.-O.M., J.M. Díaz-Gaxiola, A.W. Trites and C.J. Hernández-Camacho. 2022.
Marine Mammal Science 38:374-382.
abstract
Guadalupe fur seals (Arctocephalus townsendi) have established a second colony in the Gulf of California on El Farallón de San Ignacio Island, along the mainland coast of Mexico. They appear to have been coming to this island since 2014, and numbered as many as 771 in 2020 (mostly juveniles). The discovery of this new haulout brings the total number of sites where this species is known to rest and breed to just four. Guadalupe fur seals remain vulnerable and may require additional protection in the southern Gulf of California to secure their future.

keywords     Guadalupe, fur seal, endangered, Mexico, El Farallón de San Ignacio Island, Gulf of California, haulout
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Modelling multi-scale state-switching functional data with hidden Markov models.
Sidrow, E., N. Heckman, S. M. E. Fortune, A. W. Trites, I. Murphy and M. Auger-Méthé. 2022.
Canadian Journal of Statistics 50:327-356.
abstract
Data sets comprised of sequences of curves sampled at high frequencies in time are increasingly common in practice, but they can exhibit complicated dependence structures that cannot be modelled using common methods of Functional Data Analysis (FDA). We detail a hierarchical approach which treats the curves as observations from a hidden Markov model (HMM). The distribution of each curve is then defined by another fine-scale model which may involve auto-regression and require data transformations using moving-window summary statistics or Fourier analysis. This approach is broadly applicable to sequences of curves exhibiting intricate dependence structures. As a case study, we use this framework to model the fine-scale kinematic movement of a northern resident killer whale (Orcinus orca) off the western coast of Canada. Through simulations, we show that our model produces more interpretable state estimation and more accurate parameter estimates compared to existing methods.

keywords     Accelerometer data; animal movement; biologging; diving behaviour; hierarchical modelling; killer whales; state-switching; statistical ecology; time series
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Data on the diets of Salish Sea harbour seals from DNA metabarcoding.
Thomas, A. C., B. Deagle, C. Nordstrom, S. Majewski, B. Nelson, A. Acevedo-Gutierrez, S. Jeffries, J. Moore, A. Louden, H. Allegue, S. Pearson, M. Schmidt and A. W. Trites. 2022.
Scientific Data 9:68
abstract
Marine trophic ecology data are in high demand as natural resource agencies increasingly adopt ecosystem-based management strategies that account for complex species interactions. Harbour seal (Phoca vitulina) diet data are of particular interest because the species is an abundant predator in the northeast Pacific Ocean and Salish Sea ecosystem that consumes Pacific salmon (Oncorhynchus spp.). A multi-agency effort was therefore undertaken to produce harbour seal diet data on an ecosystem scale using, 1) a standardized set of scat collection and analysis methods, and 2) a newly developed DNA metabarcoding diet analysis technique designed to identify prey species and quantify their relative proportions in seal diets. The DNA-based dataset described herein contains records from 4,625 harbour seal scats representing 52 haulout sites, 7 years, 12 calendar months, and a total of 11,641 prey identifications. Prey morphological hard parts analyses were conducted alongside, resulting in corresponding hard parts data for 92% of the scat DNA samples. A custom-built prey DNA sequence database containing 201 species (192 fishes, 9 cephalopods) is also provided.

keywords     Marine, trophic ecology, data, harbor seal, Phoca vitulina, diet, Pacific Ocean, Salish Sea DNA metabarcoding, DNA proportions, scats, salmon, hake, herring
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2021
 
Body growth of North Atlantic right whales (Eubalaena glacialis) revisited.
Fortune, S. M. E., M. J. Moore, W. L. Perryman and A. W. Trites. 2021.
Marine Mammal Science 37:433-447.
abstract
Knowing size‐at‐age is important for determining food requirements and making inferences about the nutritional status of individuals and their populations. Accurate growth curves are also needed to quantify drug dosages to treat wounded or entangled animals. However, body sizes are often based on small numbers of measured animals that must be improved as new data become available. We updated an existing body growth model for North Atlantic right whales (NARWs) using new data from dead animals and from older individuals. Our models indicate that NARWs attain mean lengths and weights of 4.3 m and 1.0 mt at birth, and 13.1 m and 31.7 mt when sexually mature. Calves more than double their length and attain nearly three‐quarters of their asymptotic adult size during their first year of life. Overall, our length estimates agreed well with previous estimates, but our mass‐at‐age values were considerably higher. These differences revealed that necropsy data used alone in allometric models underestimate mass due possibly to several of the stranded animals in the database having been chronically entangled and in poor body condition. Augmenting the database with healthier individuals, such as harvested North Pacific right whales, yielded mass predictions that reflect both healthy and unhealthy individuals.

keywords     body size, Eubalaena glacialis, growth models, length, mass, morphometry, photogrammetry
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Foraging habitat of North Atlantic right whales has declined in the Gulf of St. Lawrence, Canada, and may be insufficient for successful reproduction.
Gavrilchuk, K., V. Lesage, S.M.E. Fortune, A.W. Trites, and S. Plourde. 2021.
Endangered Species Research. 44:113-136.
abstract
North Atlantic right whale (Eubalaena glacialis) population fed in the Gulf of St. Lawrence (Canada) in recent years. However, little is known about the distribution of copepods in the Gulf, and whether their abundance is sufficient to energetically sustain right whales. We used a mechanistic modeling approach to predict areas within the Gulf that have foraging potential for adult female right whales, based on the annual energetic needs of resting, pregnant, and lactating females, and their theoretical prey density requirements. We identified suitable foraging areas for right whales by coupling a foraging bioenergetics model with a 12-year data set (2006-2017) describing the abundance and three-dimensional distribution of late-stage Calanus spp. in the Gulf. Prey densities in the southern Gulf (from Shediac Valley to the Magdalen Islands) supported all three reproductive states in most (≥ 6) years. However, foraging habitat became progressively sparse in the southern Gulf over time, with noticeably less suitable habitat available after 2014. Few other potentially suitable foraging areas were identified elsewhere in the Gulf. Overall, the availability of foraging habitat in the Gulf varied considerably between years, and was higher for resting females than for pregnant and lactating females. Our findings are consistent with the recent low calving rates, and indicate that prey biomass in the Gulf of St. Lawrence may be insufficient in most years to support successful reproduction of North Atlantic right whales.

keywords     nutritional stress, bioenergetics, endangered, copepods, energy requirements, foraging, habitat, Calanus, right whale, Gulf of St Lawrence, prey density
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Transient Killer Whales of Central and Northern California and Oregon: A Catalog of Photo-Identified Individuals.
McInnes, J.D., C.R. Mathieson, P.J. West-Stap, S.L. Marcos, V.L. Wade, P.A. Olson and A.W. Trites. 2021.
NOAA Technical Memorandum NMFS-SWFSC-644:149 p.
abstract
Photo-identification studies of transient killer whales (Orcinus orcas) off western North America have primarily been conducted in the coastal inland waterways of Washington State, British Columbia, and southeastern Alaska. Less is known about transient killer whales along the outer coast and offshore waters of Oregon and central and northern California. We examined 13 years of photo-identification data to identify individuals and obtain a minimum census for this region, and to summarize information that could be useful for evaluating a hypothesis that whales using this area belong to a distinct assemblage. Data contributions came from opportunistic marine mammal surveys, whale watch ecotours, and dedicated line transect surveys. Transient killer whale photographs were obtained from 146 encounters between 2006 – 2018. These included 136 encounters in Monterey Bay, California, 5 encounters off central and northern California, and 5 encounters off Oregon. The number of unique individuals seen during this time totaled 155, of which 150 were considered to be alive (as of 2018). These included 34 adult males, 51 adult females, 24 sub-adults, and 41 juveniles. Through repeated observations of association patterns, a total of 30 matrilineal groups were identified. New whales were identified each year, including previously unidentified adults and new calves. Identification images of the dorsal fins, saddle patches and postocular patches were obtained. Details on sex, maternal ancestry, sighting history, and distribution are provided where known. These cataloged transient killer whales were predominantly encountered off the outer coast near the continental shelf break or in deep pelagic waters overlying the Monterey Submarine Canyon. The vast majority (>83 %) of whales identified in the study area could not be matched to transient killer whales in photo ID catalogs for coastal waters of the Pacific Northwest. These factors are consistent with there being a distinct “outer coast” assemblage within the west coast population of transient killer whales, but more research is needed to investigate this further.
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Southern resident killer whales encounter higher prey densities than northern resident killer whales during summer.
Sato, M., A.W. Trites and S. Gauthier. 2021.
Canadian Journal of Fisheries and Aquatic Sciences 78:1732-1743.
abstract
The decline of southern resident killer whales may be due to a shortage of prey, but there is little data to test this hypothesis. We compared the availability of prey (Chinook salmon) sought by southern residents in Juan de Fuca Strait during summer with the abundance and distribution of Chinook available to the much larger and growing population of northern resident killer whales feeding in Johnstone Strait. We used ship-based multifrequency echosounders to identify differences in prey fields that may explain the dynamics of these two killer whale populations. Contrary to expectations, we found that both killer whale habitats had patchy distributions of prey that did not differ in their frequencies of occurrence, nor in the size compositions of individual fish. However, the density of fish within each patch was 4-6 times higher in the southern resident killer whale habitat. These findings do not support the hypothesis that southern resident killer whales are experiencing a prey shortage in the Salish Sea during summer and suggest a combination of other factors is affecting overall foraging success.
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Pacific great blue herons consume thousands of juvenile salmon.
Sherker, Z.T., K. Pellett, J. Atkinson, J. Damborg and A.W. Trites. 2021.
Canadian Journal of Zoology 99:349-361.
abstract
An array of predators that consume juvenile salmon may account for the poor returns of adult salmon to the Salish Sea. However, the Pacific great blue heron (Ardea herodias fannini) is rarely listed among the known salmon predators, despite being regularly seen near salmon streams. Investigating heron predation by scanning nesting sites within 35 km of three British Columbia rivers for fecal remains containing Passive Integrated Transponder (PIT) tags implanted in >100,000 juvenile salmon from 2008-2018 yielded 1,205 tags, representing a minimum annual predation rate of 0.3-1.3% of all juvenile salmon. Most of this predation (99%) was caused by ~420 adult herons from three heronries. Correcting for tags defecated outside of the heronry raised the predation rates to 0.7-3.2%-and was as high as 6% during a year of low river flow. Predation occurs during chick-rearing in late spring, and accounts for 4.1-8.4% of the heron chick diet. Smaller salmon smolts were significantly more susceptible to heron predation than larger conspecifics. The proximity of heronries relative to salmon bearing rivers is likely a good predictor of heron predation on local salmon runs, and can be monitored to assess coast-wide effects of great blue herons on salmon recovery.

keywords     predation, salmon, smolts, herons, chicks, diet
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Cardiac examinations of anesthetized Steller sea lions (Eumetopias jubatus), northern fur seals (Callorhinus ursinus), and a walrus (Odobenus rosmarus).
Storlund, R.L., D.A.S. Rosen, M. Margiocco, M. Haulena and A.W. Trites. 2021.
Journal of Zoo and Wildlife Medicine 52(2):507-519.
abstract
Pinniped hearts have been well described via dissection, but in vivo measurements of cardiac structure, function, and electrophysiology are lacking. Electrocardiograms (ECGs) were recorded under anesthesia from 8 Steller sea lions (Eumetopias jubatus), 5 northern fur seals (Callorhinus ursinus), and 1 walrus (Odobenus rosmarus) to investigate cardiac electrophysiology in pinnipeds. In addition, echocardiograms were performed on all 8 anesthetized Steller sea lions to evaluate in vivo cardiac structure and function. Measured and calculated ECG parameters included P‑wave, PQ, QRS, and QT interval durations, P‑, R‑, and T‑wave amplitudes, P‑ and T‑wave polarities, and the mean electrical axis (MEA). Measured and calculated echocardiographic parameters included left ventricular internal diameter, interventricular septum thickness, and left ventricular posterior wall thickness in systole and diastole (using M-mode), left atrium and aortic root dimensions (using 2D), and maximum aortic and pulmonary flow velocities (using pulsed wave spectral Doppler). ECG measurements were similar to those reported for other pinniped species, but there was considerable variation in the MEAs of Steller sea lions and northern fur seals. Echocardiographic measurements were similar to those reported for southern sea lions (Otaria flavenscens), including 5 out of 8 Steller sea lions having a left atrial to aortic root ratio < 1, which may indicate that they have an enlarged aortic root compared to awake terrestrial mammals. Isoflurane anesthesia likely affected some of the measurements as evidenced by the reduced fractional shortening found in Steller sea lions compared to awake terrestrial mammals. The values reported are useful reference points for assessing cardiac health in pinnipeds under human care.
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Electrocardiographic scaling reveals differences in electrocardiogram interval durations between marine and terrestrial mammals.
Storlund, R.L., D.A.S. Rosen and A.W. Trites. 2021.
Frontiers in Physiology 12:690029
abstract
Although the ability of marine mammals to lower heart rates for extended periods when diving is well documented, it is unclear whether marine mammals have electrophysiological adaptations that extend beyond overall bradycardia. We analyzed electrocardiographic data from 50 species of terrestrial mammals and 19 species of marine mammals to determine whether the electrical activity of the heart differs between these two groups of mammals. We also tested whether physiological state (i.e., anesthetized or conscious) affects electrocardiogram (ECG) parameters. Analyses of ECG waveform morphology (heart rate, P-wave duration, and PQ, PR, QRS, and QT intervals) revealed allometric relationships between body mass and all ECG intervals (as well as heart rate) for both groups of mammals and specific differences in ECG parameters between marine mammals and their terrestrial counterparts. Model outputs indicated that marine mammals had 19% longer P-waves, 24% longer QRS intervals, and 21% shorter QT intervals. In other words, marine mammals had slower atrial and ventricular depolarization, and faster ventricular repolarization than terrestrial mammals. Heart rates and PR intervals were not significantly different between marine and terrestrial mammals, and physiological state did not significantly affect any ECG parameter. On average, ECG interval durations of marine and terrestrial mammals scaled with body mass to the power of 0.21 (range: 0.19 - 0.23) rather than the expected 0.25—while heart rate scaled with body mass to the power of -0.22 and was greater than the widely accepted -0.25 derived from fractal geometry. Our findings show clear differences between the hearts of terrestrial and marine mammals in terms of cardiac timing that extend beyond diving bradycardia. They also highlight the importance of considering special adaptations (such as breath-hold diving) when analyzing allometric relationships.

keywords     ECG, electrocardiogram, marine mammal, heart rate, anesthesia, allometry, cardiac timing, comparative electrophysiology
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Behavioral insights into the decline and natural history of Steller sea lions.
Trites, A.W. 2021.
In C. Campagna and R.G. Harcourt (eds), Ethology and behavioral ecology of otariids and the odobenid. Springer, Cham, Switzerland. pp. 489-519.
abstract
Two competing hypotheses were proposed to explain why Steller sea lions had declined in the Gulf of Alaska, Bering Sea and Aleutian Islands. One of the theories was that young sea lions were starving because fisheries had reduced the abundance of groundfish-the overfishing hypothesis. The other was that these low-fat species of fish had increased in abundance as the sea lion population declined following the 1976-1977 oceanic regime shift, and were compromising sea lion reproductive and survival rates-the junk-food hypothesis. Behavioral ecologists tested these hypotheses by comparing sea lion behaviors in the declining region (Gulf of Alaska and Aleutian Islands) with sea lion behaviors in an increasing region (Southeast Alaska) to determine whether the populations exhibited behavioral differences consistent with food shortages. These studies involved comparing dive depths, dive durations, time spent foraging, and time spent nursing by regions and seasons. Research also focused on weaning-a critical life-history stage-to determine when and how it occurs. Collectively, these observations and measures of behavioral responses revealed that most dependent young begin supplementing their milk diet with fish between April and May, and wean just before the start of the upcoming June breeding season. However, the proportion of young sea lions that wean at 1, 2 or 3 years of age appears to vary by year due to regional and temporal differences in the quantity and quality of prey available to them once weaned. None of the behavioral studies of adult and juvenile Steller sea lions supported the overfishing hypothesis-but were, instead, consistent with the junk-food hypothesis. It appears that lactating females that consume large amounts of low-energy fish (such as walleye pollock and Pacific cod) have a high probability of miscarriage, and will keep their dependent young for an extra one or two years-thereby causing birth rates and population size to decline. In contrast, lactating females that consume larger amounts of fattier fish (such as sand lance and Pacific herring) can successfully wean a pup every year. Plasticity in age at weaning appears to be an evolutionary adaptation to natural shifts in community prey structure in the North Pacific Ocean-and is an adaptation that successfully slows population declines of Steller sea lions until the ocean shifts to an alternative state containing greater portions of energy-rich fish that allows sea lion numbers to increase again.

keywords     Eumetopias jubatus, Life history, Population decline,Endangered, Maternal strategies, Phenology,Weaning, Abortions, Breeding, Junk food, Overfishing,Regime shifts
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Behavioral context of echolocation and prey-handling sounds produced by killer whales (Orcinus orcas) during pursuit and capture of Pacific salmon (Oncorhynchus spp.).
Wright, B. M., V. B. Deecke, G. M. Ellis, A. W. Trites and J. K. B. Ford. 2021.
Marine Mammal Science 37:1428-1453.
abstract
Availability of preferred salmonid prey and a sufficiently quiet acoustic environment in which to forage are critical to the survival of resident killer whales (Orcinus orcas) in the northeastern Pacific. Although piscivorous killer whales rely on echolocation to locate and track prey, the relationship between echolocation, movement, and prey capture during foraging by wild individuals is poorly understood. We used acoustic biologging tags to relate echolocation behavior to prey pursuit and capture during successful feeding dives by fish-eating killer whales in coastal British Columbia, Canada. The significantly higher incidence and rate of echolocation prior to fish captures compared to afterward confirms its importance in prey detection and tracking. Extremely rapid click sequences (buzzes) were produced before or concurrent with captures of salmon at depths typically exceeding 50 m, and were likely used by killer whales for close-range prey targeting, as in other odontocetes. Distinctive crunching and tearing sounds indicative of prey-handling behavior occurred at relatively shallow depths following fish captures, matching concurrent observations that whales surfaced with fish prior to consumption and often shared prey. Buzzes and prey-handling sounds are potentially useful acoustic signals for estimating foraging efficiency and determining if resident killer whales are meeting their energetic requirements.

keywords     biologging tag, echolocation, foraging behavior, killer whale, Orcinus orca, prey handling, salmon predation
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2020
 
Growth and development of North Pacific gray whales (Eschrichtius robustus).
Agbayani, S., S.M.E. Fortune and A.W. Trites. 2020.
Journal of Mammalogy 101:742-754.
abstract
Understanding variability in growth patterns of marine mammals provides insights into the health of individuals and status of populations. Body growth of gray whales (Eschrichtius robustus) has been described for particular life stages, but has not been quantified across all ages. We derived a comprehensive growth equation for gray whales by fitting a two-phased growth model to age-specific length data of eastern North Pacific gray whales that were captured, stranded, or harvested between 1926 and 1997. To predict mass-at-age, we used the allometric relationship between mass and length. We found that on average (± SD), calves were 4.6 ± 0.094 m and 972 ± 27 kg at birth, and reached 8.53 ± 0.098 m and 7,645 ± 162 kg by the end of their first year of life (n = 118). Thus, calves almost double (2×) in length and octuple (8×) in mass while nursing, and are effectively about two-thirds of their asymptotic adult length and one-third of their maximum mass when weaned. The large sample of aged individuals (n = 730) indicates that gray whales live up to ~48 years and have a life expectancy of < 30 years. Adult females attain a mean (± SD) asymptotic size of 13.2 ± 0.054 m and 20,706 ± 249 kg, while the smaller males average 12.6 ± 0.054 m and 19,812 ± 249 kg at ~40 years of age. Females are thereby ~4% longer and heavier than males. These age-specific estimates of body size can be used to estimate food requirements and assess nutritional status of individuals.

keywords     eastern gray whale, growth curves, length, life expectancy, longevity, mass, morphometrics, Putter model, sexual dimorphism
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Harbour seals responded differently to pulses of out-migrating coho and Chinook smolts.
Allegue, H., A.C. Thomas, Y. Liu, and A.W. Trites. 2020.
Marine Ecology Progress Series 647:21-227.
abstract
There is increasing evidence that predation by harbour seals on out-migrating salmon smolts may be responsible for the low return of adult coho and Chinook salmon in the Salish Sea. However, little attention has been given to understanding where and when this predation occurs, and the extent to which it might be conducted by few or many seals in the population. We equipped 17 harbour seals with data-loggers to track seal movements, and used accelerometry to infer prey encounter events (PEE) following the release of ~384,000 coho (May 4th) and ~3 million Chinook smolts (May 14th) into the Big Qualicum River. We found a small proportion (5.7%) of all PEE occurred in the estuary where salmon smolts entered the ocean-and that only one-quarter of the seals actively fed there. PEE counts increased in the estuary after both species of smolts were released. However, the response of the seals was less synchronous and occurred over a greater range of depths following the release of the smaller-bodied and more abundant Chinook smolts. Harbour seals feeding in the estuary appeared to target coho smolts at the beginning of May, but appeared to pursue predators of Chinook smolts in mid-May. PEE counts in the estuary increased as tide height rose, and were higher at dusk and night-especially during full moonlight. Such fine-scale behavioural information about harbour seals in relation to pulses of out-migrating smolts can be used to design mitigation strategies to reduce predation pressure by seals on salmon populations.

keywords     predation, salmon, harbour seals, coho, Chinook, data-loggers, biologging, accelerometry, accelerometers, prey encounters, estuary, size selection, mitigation, PIT tags
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Prey composition impacts lipid and protein digestibility in northern fur seals, Callorhinus ursinus.
Diaz Gomez, M., D.A.S. Rosen, I.P. Forster and A.W. Trites. 2020.
Canadian Journal of Zoology 68:681-689.
abstract
Pinnipeds have specific macronutrient (protein, lipid) requirements to satisfy physiological functions, yet little is known about how diet characteristics affect macronutrient digestibility. We measured relative and absolute lipid and protein digestibility in six female northern fur seals (Callorhinus ursinus (Linnaeus 1758)) fed eight experimental diets composed variously of four prey species (Pacific herring (Clupea pallasii Valenciennes in Cuvier and Valenciennes 1847), walleye pollock (Gadus chalcogrammus Pallas 1814, formerly Theragra chalcogrammus (Pallas 1814)), capelin (Mallotus villosus (Müller 1776) and magister armhook squid (Berryteuthis magisterial (Berry 1913)). We quantified how digestibility was affected by proximate composition of the diet (%lipid or protein), levels of food mass and macronutrient intake, and tested for any potential benefit of multi-species diets. Overall, digestibility of both protein and lipid were high across diets, although macronutrient retention of lipids (96.0–98.4%) was significantly higher than protein (95.7–96.7%) for all but the two highest protein diets. Increased levels of protein intake resulted in increased protein retention, but decreased lipid digestibility. There was no evidence that mixed-species diets provide greater macronutrient digestibility over single-species diets. The results suggest that high to moderate lipid diets are more beneficial to northern fur seals as they lead to increased levels of lipid retention without large decreases in protein digestibility. This raises concerns that dietary factors may be contributing to the population declines of northern fur seals in the Bering Sea.

keywords     Northern fur seal, Callorhinus ursinus, diet composition, macronutrients, lipid digestibility, protein digestibility
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Bowhead whales use two foraging strategies in response to fine-scale differences in zooplankton vertical distribution.
Fortune, S.M.E., S.H. Ferguson, A.W. Trites, J.M. Hudson, and M.F. Baumgartner. 2020.
Scientific Reports 10:20249
abstract
As zooplanktivorous predators, bowhead whales (Balaena mysticetus) must routinely locate patches of prey that are energy-rich enough to meet their metabolic needs. However, little is known about how the quality and quantity of prey might influence their feeding behaviours. We addressed this question using a new approach that included: 1) multi-scale biologging and unmanned aerial system observations of bowhead whales in Cumberland Sound, Nunavut (Canada), and 2) an optical plankton counter (OPC) and net collections to identify and enumerate copepod prey species through the water column. The OPC data revealed two prey layers comprised almost exclusively of lipid-rich calanoid copepods. The deep layer contained fewer, but larger, particles (10% greater overall biomass) than the shallow prey layer. Dive data indicated that the whales conducted long deep Square-shaped dives (80% of dives; averaging depth of 260.4 m) and short shallow Square-shaped dives (16%; averaging depth of 22.5 m) to feed. The whales tended to dive proportionally more to the greater biomass of zooplankton that occurred at depth. Combining behavioural recordings with prey sampling showed a more complex feeding ecology than previously understood, and provides a means to evaluate the energetic balance of individuals under current environmental conditions.

keywords     bowhead whales, foraging
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Seasonal diving and foraging behaviour of Eastern Canada-West Greenland bowhead whales.
Fortune, S. M. E., S. H. Ferguson, A. W. Trites, B. LeBlanc, V. LeMay, J. M. Hudson and M. F. Baumgartner. 2020.
Marine Ecology Progress Series 643:197-217.
abstract
Climate change may affect the foraging success of bowhead whales Balaena mysticetus by altering the diversity and abundance of zooplankton species available as food. However, assessing climate-induced impacts first requires documenting feeding conditions under current environmental conditions. We collected seasonal movement and dive-behaviour data from 25 Eastern Canada-West Greenland bowheads instrumented with time-depth telemetry tags and used state-space models to examine whale movements and dive behaviours. Zooplankton samples were also collected in Cumberland Sound (CS) to determine species composition and biomass. We found that CS was used seasonally by 14 of the 25 tagged whales. Area-restricted movement was the dominant behaviour in CS, suggesting that the tagged whales allocated considerable time to feeding. Prey sampling data suggested that bowheads were exploiting energy-rich Arctic copepods such as Calanus glacialis and C. hyperboreus during summer. Dive behaviour changed seasonally in CS. Most notably, probable feeding dives were substantially shallower during spring and summer compared to fall and winter. These seasonal changes in dive depths likely reflect changes in the vertical distribution of calanoid copepods, which are known to suspend development and overwinter at depth during fall and winter when availability of their phytoplankton prey is presumed to be lower. Overall, CS appears to be an important year-round foraging habitat for bowheads, but is particularly important during the late summer and fall. Whether CS will remain a reliable feeding area for bowhead whales under climate change is not yet known.

keywords     Climate change, zooplankton, prey availability, foraging behavior, biologging, state-space model, bowhead whale, copepods, Calanus
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Predator control on land and at sea: a call for common standards of assessment.
Nunny, L., C. Bautista, S. Palazón, A.W. Trites, D. van Liere, and M.P. Simmonds. 2020.
Carnivore Prevention Damage News. 20:13-19.
abstract
Carnivores come into conflict with humans when they cause damage to livestock, crops and other prop­erty. However, conflict is not only a land-based issue. As in terrestrial settings, human-wildlife conflict in the marine environment can have signif­icant financial repercussions and present animal wel­fare issues. To encourage sharing of knowledge on alternative approaches to managing wildlife conflict situations, a work­shop entitled Predator controls: lessons from land to sea was convened at the World Marine Mammal Con­ference in Barcelona, Spain in December 2019. Workshop participants concluded that: 1. Whilst there appears to be little transfer of an­ti-predator technologies between land and sea, people who farm and fish have common issues in­cluding ensuring the effectiveness of the measures deployed. This warrants a formal assessment of the common issues and solutions and a proper assess­ment of their welfare implications. 2. The welfare implications of conflict mitigation methods concerned many attending the workshop. How control methods impact predator welfare de­pends on the method used and how it is applied. 3. Standard protocols to assess the welfare and effec­tiveness of conflict mitigation techniques need to be developed and endorsed by the international community and could apply equally to land and sea situations. The approach used by Sharp and Saunders (2011) was noted as promising, as is the welfare assessment tool developed by the Interna­tional Whaling Commission. 4. Reducing conflict requires a thorough under­standing of the situation, including socio-eco­nomic aspects, determining whether the conflict is limited to individual problem animals or is more pervasive and evaluating how the problem at the site has developed. In addition, it is necessary to determine whether the conflict is more prevalent at a particular time of year, in a particular location or under certain ecological conditions or geopo­litical circumstances. Conflict resolution requires gathering as much in­formation as possible about the conflict in order to take appropriate actions and is an area where marine experts can learn from the experiences of terrestrial experts and vice versa. For this reason, providing plat­forms to marine and terrestrial experts to exchange knowledge and experience can benefit the conser­vation and welfare of wild predators on land and in the sea.
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2019
 
A mechanistic approach to predicting suitable foraging habitat for reproductively mature North Atlantic right whales in the Gulf of St. Lawrence, Canada.
Gavrilchuk, K., V. Lesage, S. Fortune, A.W. Trites, and S. Plourde. 2019.
Canadian Science Advisory Secretariat (CSAS), Research Document 2019/034 pp. 51
abstract
The North Atlantic right whale (Eubalaena glacialis, NARW) is an endangered cetacean which faces population decline from anthropogenic activities. Climate change may also be adding pressure on population recovery by shifting distribution of their preferred prey, Calanus copepods. The Gulf of St. Lawrence (GSL) in eastern Canada has been used as a foraging ground by a large proportion of the NARW population in recent years (at least from 2015 to present). Given the motivation to better understand NARW contemporary habitat use patterns and propose recovery measures for this population, we used a mechanistic modeling approach to predict areas that hold foraging potential in the GSL. We first assessed the overall annual energetic costs incurred by an adult female NARW in one of three reproductive states, and determined the theoretical prey densities required to sustain energy demand. We used a 12-year data set describing the abundance and three-dimensional distribution of late-stage Calanus copepods in the GSL coupled to a foraging bioenergetics model to identify potentially suitable foraging areas for NARW. Results show interannual variations in the spatial distribution and quantity of suitable habitat, with a decreasing amount of habitat available for resting, pregnant and lactating females, respectively. Suitable prey densities for foraging NARW were found in nearly all areas of the GSL that were surveyed for copepods, in one year or another, with a greater frequency of suitable prey densities identified in the southern GSL. Yearly maps of suitable foraging habitat for NARW were superimposed to identify areas that showed temporal persistence; the southern GSL (from Shediac Valley east to the Magdalen Islands) had suitable prey densities for all three reproductive states in most (≥ 6) years of the study period. For resting and pregnant females, other potential areas of foraging importance included offshore of Chaleurs Bay as well as the southern slope of the Laurentian Channel north of the Magdalen Islands. These findings highlight areas where NARWs may occur based on habitat modelled foraging value, and emphasize the need to survey offshore, under-studied regions in the GSL to better characterize NARW occurrence and habitat use patterns.
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Wild Chinook salmon productivity is negatively related to seal density, and not related to hatchery releases in the Pacific Northwest.
Nelson, B.W., C.J. Walters, A.W. Trites, and M.K. McAllister. 2019.
Canadian Journal of Fisheries and Aquatic Sciences 76:447-462.
abstract
Predation risk and competition among conspecifics significantly affect survival of juvenile salmon, but are rarely incorporated into models that predict recruitment in salmon populations. Using densities of harbour seals (Phoca vitulina) and numbers of hatchery-released smolts as covariates in spatially-structured Bayesian hierarchical stock-recruitment models, we found significant negative correlations between seal densities and productivity of Chinook salmon (Oncorhynchus tshawytscha) for 14 of 20 wild Chinook populations in the Pacific Northwest. Changes in numbers of seals since the 1970s were associated with a 74% decrease (95% CI: -85%, -64%) in maximum sustainable yield in Chinook stocks. In contrast, hatchery releases were significantly correlated with Chinook productivity in only one of 20 populations. Our findings are consistent with recent research on predator diets and bioenergetics modeling that suggest there is a relationship between harbour seal predation on juvenile Chinook and reduced marine survival in parts of the eastern Pacific. Forecasting, assessment, and recovery efforts for salmon populations of high conservation concern should thus consider including biotic factors, particularly predator-prey interactions.

keywords     salmon, seal density, hatchery
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Marine mammal trophic levels and interactions.
Trites, A.W. 2019.
In J.K. Cochran, P.L. Yager and H.J. Bokuniewicz (eds.), Marine life, Encyclopedia of ocean sciences, Academic Press, London.  2:589-584.
abstract
Calculating trophic levels is a necessary first step to quantify and understand trophic interactions between marine mammals and other species in marine ecosystems. This can be achieved using dietary information collected from stomachs and scats, or by measuring isotopic ratios contained in marine mammal tissues. These data indicate that marine mammals occupy a wide range of trophic levels beginning with dugong and manatees (trophic level 2.0), and followed by baleen whales (3.35), sea otters (3.45), seals (3.95), sea lions and fur seals (4.03), toothed whales (4.23) and polar bears (4.80). With the aid of ecosystem models and other quantitative analyses, the degree of competition can be quantified, and the consequences of changing predator-prey numbers can be predicted. These analyses show that many species of fish are major competitors of marine mammals. A number of field studies have also shown negative effects of reduced prey abundance on body size and survival of marine mammals. However, there are fewer examples of marine mammal populations affecting their prey due perhaps to the difficulty of monitoring such interactions, or to the complexity of most marine mammal food webs
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Synthesis of scientific knowledge and uncertainty about population dynamics and diet preferences of harbour seals, Steller sea lions and California sea lions, and their impacts on salmon in the Salish Sea.
Trites, Andrew W. and D.A.S. Rosen. 2019.
Technical Workshop Proceedings. May 29-30, 2019, Marine Mammal Research Unit, University of British Columbia Vancouver, BC. pp. 67
abstract
This workshop assembled scientists and managers with technical expertise on seals, sea lions, and salmonids to identify and evaluate knowledge and uncertainties about the diets and population dynamics of pinnipeds (harbour seals, Steller sea lions, and California sea lions), as well as the impacts that pinnipeds may be having on salmonids in British Columbia and Washington State waters. The primary focal area was the Salish Sea, but included coastal Washington and British Columbia. Pinniped impacts in the Columbia River basin were not addressed. The workshop focused on what is known about predation by seals and sea lions on salmon-and how assumptions and uncertainties in the data affect the conclusions drawn to date about the effect of pinnipeds on salmon. This workshop was a first step in bringing together scientists and managers with pinniped and salmon expertise from Canada and the United States to identify and evaluate the impact that pinnipeds may be having on salmonids. It has identified the major knowledge gaps and need for focused research to address the key uncertainties that prevent drawing definitive conclusions about the role that pinnipeds play in the Salish Sea and their impact on other important ecosystem components such as salmon.
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2018
 
Correction: Evidence of molting and the function of 'rock-nosing' behavior in bowhead whales in the eastern Canadian Arctic.
Fortune, S.M.E., W.R. Koski, J.W. Higdon, A.W. Trites, M.F. Baumgartner, and S.H. Ferguson. 2018.
PLoS ONE 13:e0192813.
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Reference ranges and age-related and diving exercise effects on hematology and serum chemistry of female Steller sea lions (Eumetopias jubatus).
Gerlinsky, C. D., M. Haulena, A. W. Trites and D. A. S. Rosen. 2018.
Journal of Zoo and Wildlife Medicine 49(1):18-29.
abstract
Decreased health may have lowered the birth and survival rates of Steller sea lions (Eumetopias jubatus) in the Gulf of Alaska and Aleutian Islands over the past 30 yr. Reference ranges for clinical hematology and serum chemistry parameters needed to assess the health of wild sea lion populations are limited. Here, blood parameters were serially measured in 12 captive female Steller sea lions ranging in age from 3 wk to 16 yr to establish baseline values and investigate age-related changes. Whether diving activity affects hematology parameters in animals swimming in the ocean compared with animals in a traditional aquarium setting was also examined. Almost all blood parameters measured exhibited significant changes with age. Many of the age-related changes reflected developmental life history changes, including a change in diet during weaning, an improvement of diving capacity, and the maturity of the immune system. Mean corpuscular hemoglobin and mean corpuscular volume were also higher in the ocean diving group compared with the aquarium group, likely reflecting responses to increased exercise regimes. These data provide ranges of hematology and serum chemistry values needed to evaluate and compare the health and nutritional status of captive and wild Steller sea lions.

keywords     Diving, Eumetopias jubatus, hematology, marine mammal, serum chemistry, Steller sea lion
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Population viability analysis of Guadalupe fur seals (Arctocephalus townsendi).
Hernández-Camacho, C.J., Trites, A.W. 2018.
Endangered Species Research. 37:255-267.
abstract
The Guadalupe fur seal Arctocephalus townsendi was intensively hunted and considered extinct by the end of the 1800s. However, small numbers (<20 seals) were reported on Guadalupe Island (Mexico) in the mid-1950s and were observed at a second location (San Benito Islands, Mexico) in the late 1990s. Sporadic counts at these 2 sites have followed a relatively rapid increase in numbers, but considerable uncertainty remains about the long-term viability of this recovering species. We performed a population viability analysis using historic seal counts from Guadalupe Island and the San Benito Islands to predict the probability of each colony (and both colonies combined) going extinct under 3 critical population threshold scenarios (100, 500, and 1000 seals). Using a diffusion approximation model, we found that the growth rates of the 2 colonies were similar (10−11% yr−1) and that the population totaled ~41 000 individuals in 2017 (⎯x = 40 614, 95% CI = 35 779−46 877). Guadalupe fur seals appear to be vulnerable to extreme climatic events. Of the 2 fur seal colonies, the San Benito Islands colony is less secure and is Endangered to Critically Endangered, depending on the quasi-extinction value used under the quantitative listing criteria established by the IUCN. In contrast, the Guadalupe Island colony and the 2 colonies combined meet the quantitative analysis criteria of Least Concern. Population viability analysis is an important component of assessing the status of wildlife populations and assisting nations and organizations in assigning appropriate categories of protection.

keywords     Guadalupe fur seal, population viability analysis, PVA, probability of extinction, endangered species, population trend, pinnipeds
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Trade-off between foraging efficiency and pup feeding rate of lactating northern fur seals in a declining population.
Jeanniard-du-Dot, T., A.W. Trites, J.P.Y. Arnould, J.R. Speakman, and C. Guinet. 2018.
Marine Ecology Progress Series 600:207-222.
abstract
Foraging strategies and their resulting efficiency (energy gain to cost ratio) affect animals' survival and reproductive success and can be linked to population dynamics. However, they have rarely been studied quantitatively in free-ranging animals. We investigated foraging strategies and efficiencies of wild northern fur seals Callorhinus ursinus during their breeding season to understand potential links to the observed population decline in the Bering Sea. We equipped 20 lactating females with biologgers to determine at-sea foraging behaviors. We measured energy expenditure while foraging using the doubly labeled water method, and energy gained using (1) the types and energy densities of prey consumed, and (2) the number of prey capture attempts (from acceleration data). Our results show that seals employed 2 foraging strategies. One group (40%) fed mostly in oceanic waters on small high energy-density prey, while the other (60%) stayed over the shallow continental shelf feeding mostly on larger, lower quality fish. Females foraging in oceanic waters captured 3 times more prey, and had double the foraging efficiencies of females that foraged on-shelf in neritic waters. However, neritic seals made comparatively shorter trips, and likely fed their pups ~20-25% more frequently. The presence of these strategies which either favor foraging efficiency (energy) or frequency of nursing (time) might be maintained in the population because they have similar net fitness outcomes. However, neither strategy appears to simultaneously maximise time and energy allocated to nursing, with potential impacts on the survival of pups during their first year at sea.
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Continued decline of a collapsed population of Atlantic cod (Gadus morhua) due to predation-driven Allee effects.
Neuenhoff, R.D., D.P. Swain, M.K.M. Sean P Cox, A.W. Trites, C.J. Walters, and M.O. Hammill. 2018.
Canadian Journal of Fisheries and Aquatic Sciences 76:168-184.
abstract
Most stocks of Atlantic cod (Gadus morhua) in the northwest Atlantic collapsed in the early 1990s, with little sign of recovery since then. In the southern Gulf of St. Lawrence (sGSL), the failed recovery is due to severe increases in the natural mortality of adult Atlantic cod. We examined the role of predation by grey seals (Halichoerus grypus) in this failed recovery by directly incorporating grey seal predation in the population model for Atlantic cod via a functional response. Estimated predation mortality of adult Atlantic cod increased sharply during the cod collapse and has continued to increase, comprising the majority of mortality since the early 2000's. While predation by grey seals appeared to play a minor role in the collapse of Atlantic cod, we found it to be the main factor preventing recovery. Our results are consistent with the hypothesis that failed recovery is due to predation-driven Allee effects, a demographic effect due to the decline in cod abundance and an emergent effect resulting from increasing grey seal abundance. Under current conditions, extirpation of sGSL Atlantic cod appears likely unless there is a large decline in the abundance of grey seals.
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Ecology, archaeology and historical accounts demonstrate the whaling practices of the Quileute tribe in Washington State.
Robertson, F.C. and A.W. Trites. 2018.
Society of American Archaeology Archaeological Record 18(4):23-30.
abstract
The field notes of Frachtenberg (1916) and others note that the Quileute had been practicing whaling since immemorial times. Additional historical and archaeological data confirm that the Quileute successfully hunted and consumed many of the same species taken by the Makah and Nuu-chah-nulth whale hunters during and before treaty times. The archaeological, historical, and ecological data are thus consistent with the Quileute hunters being exceptional seamen, navigators, and whalers.

keywords     whales, whaling, indigenous people, prehistoric, middens, gray whale, humpback whale, fin whale, blue whale, sperm whale, right whale
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Telemetry tags increase the costs of swimming in northern fur seals, Callorhinus ursinus.
Rosen, D. A. S., C. D. Gerlinsky and A. W. Trites. 2018.
Marine Mammal Science 34 (2):385-402. doi:10.1111/mms.12460
abstract
Animal-borne instruments have become a standard tool for collecting important data from marine mammals. However, few studies have examined whether placement of these data loggers affects the behavior and energetics of individual animals, potentially leading to biasing data. We measured the effect of two types of relatively small data loggers (<1% of animals

keywords     northern fur seals, Callorhinus ursinus, telemetry, bioenergetics, biologging, diving, swimming, marine mammal
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Prey consumption by cetaceans reveals the importance of energy-rich food webs in the Bay of Biscay.
Spitz, J., V. Ridoux, A. W. Trites, S. Laran and M. Authiera. 2018.
Progress in Oceanography 166(2018):148-158.
abstract
Ecosystem-based management requires a clear understanding of marine ecosystem functioning, particularly the transfer of energy (consumption) to higher trophic levels. However, robust estimates of consumption are generally hampered by a dearth of data for predators (diet and abundance), and by methodological weaknesses. We undertook a comprehensive assessment of energy requirements and prey consumption for the 10 most abundant cetacean species in the Bay of Biscay (northeastern Atlantic Ocean, France) by combining recent data on their abundances from aerial surveys, and diets from stomach content analyses. We also incorporated functional considerations to group prey and address interspecific differences in the cost of living of cetaceans that are independent of body size. Species considered included harbour porpoise, common dolphins, striped dolphins, bottlenose dolphins, long-finned pilot whales, Risso's dolphins, sperm whales, Cuvier's beaked whales, minke whales and fin w hales. We used Monte Carlo resampling methods to estimate annual and seasonal (winter and summer) consumption over the continental shelf and slope

keywords     food webs, consumption, cetaceans, continental shelf, toothed whales, baleen whales
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Availability of prey for southern resident killer whales. Technical workshop proceedings. November 15 - 17, 2017.
Trites, A.W. and D.A.S. Rosen (Eds.). 2018.
Marine Mammal Research Unit, Institute for the Oceans and Fisheries, University of British Columbia, Vancouver, B.C. pp. 64
abstract
This workshop assembled scientists and managers with technical expertise on killer whales and Chinook salmon to identify and evaluate short-term management actions that might increase the immediate abundance and accessibility of Chinook salmon for southern resident killer whales, given the current size of Chinook salmon stocks. The workshop did not consider ways of producing more Chinook salmon (which will be the subject of a subsequent workshop), but rather considered ways of making more of the fish that are presently in the ocean available to southern resident killer whales (SRKW). Workshop participants presented and discussed technical information on the prey requirements of SRKW, the availability of Chinook salmon, and current protections for SRKW. Participants then split into four groups with an even distribution of expertise to evaluate three potential non- exclusive Management Actions: 1) Increase the abundance of Chinook for SRKW by reducing coast-wide fishery removals; 2) Increase the abundance of Chinook for SRKW by adjusting fishery removals at specific times and in specific areas of SRWK habitat; and 3) Increase the accessibility of Chinook by decreasing underwater noise and the physical presence of vessels where SRKW forage.

keywords     killer whales, southern resident, prey, availability, abundance, accessibility, noise, disturbance, fishing, commercial, recreational, Chinook, salmon
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2017
 
Lesser devil rays Mobula cf. hypostoma from Venezuela are almost twice their previously reported maximum size and may be a new sub-species.
Ehemann, N. R., L. V. Gonzalez-Gonzalez and A. W. Trites. 2017.
Journal of Fish Biology 90:1142-1148.
abstract
Three rays opportunistically obtained near Margarita Island, Venezuela, were identified as lesser devil rays Mobula cf. hypostoma, but their disc widths were between 207 and 230 cm, which is almost double the reported maximum disc width of 120 cm for this species. These morphometric data suggest that lesser devil rays are either larger than previously recognized or that these specimens belong to an unknown sub-species of Mobula in the Caribbean Sea. Better data are needed to describe the distribution, phenotypic variation and population structure of this poorly known species.
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Evidence of molting and the function of rock-nosing behavior in bowhead whales in the eastern Canadian Arctic.
Fortune, S. M. E., W. R. Koski, J. W. Higdon, A. W. Trites, M. F. Baumgartner and S. H. Ferguson. 2017.
PLoS ONE, pages: e0186156 Vol 12(1)
abstract
Bowhead whales (Balaena mysticetus) have a nearly circumpolar distribution, and occasionally occupy warmer shallow coastal areas during summertime that may facilitate molting. However, relatively little is known about the occurrence of molting and associated behaviors in bowhead whales. We opportunistically observed whales in Cumberland Sound, Nunavut, Canada with skin irregularities consistent with molting during August 2014, and collected a skin sample from a biopsied whale that revealed loose epidermis and sloughing. During August 2016, we flew a small unmanned aerial system (sUAS) over whales to take video and still images to: 1) determine unique individuals; 2) estimate the proportion of the body of unique individuals that exhibited sloughing skin; 3) determine the presence or absence of superficial lines representative of rock-rubbing behavior; and 4) measure body lengths to infer age-class. The still images revealed that all individuals (n = 81 whales) were sloughing skin, and that nearly 40% of them had mottled skin over more than two-thirds of their bodies. The video images captured bowhead whales rubbing on large rocks in shallow, coastal areas --likely to facilitate molting. Molting and rock rubbing appears to be pervasive during late summer for whales in the eastern Canadian Arctic.
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Accelerometers can measure total and activity-specific energy expenditure in free-ranging marine mammals only if linked to time-activity budgets.
Jeanniard du Dot, T., C. Guinet, J. P. Y. Arnould, J. R. Speakman and A. W. Trites. 2017.
Functional Ecology 31:377-386.
abstract
1-Energy expenditure is an important component of foraging ecology, but is extremely difficult to estimate in free-ranging animals and depends on how animals partition their time between different activities during foraging. Acceleration data has emerged as a new way to determine energy expenditure at a fine scale but needs to be tested and validated in wild animals. 2-This study investigated whether vectorial dynamic body acceleration (VeDBA) could accurately predict the energy expended by marine predators during a full foraging trip. We also aimed to determine whether the accuracy of predictions of energy expenditure derived from acceleration increased when partitioned by different types of at-sea activities (i.e., diving, transiting, resting and surface activities) vs calculated activity-specific metabolic rates. 3-To do so, we equipped 20 lactating northern (Callorhinus ursinus) and 20 Antarctic fur seals (Arctocephalus gazella) with GPS, time-depth recorders and tri-axial accelerometers, and obtained estimates of field metabolic rates using the doubly-labelled water (DLW) method. VeDBA was derived from tri-axial acceleration, and at-sea activities (diving, transiting, resting and surface activities) were determined using dive depth, tri-axial acceleration and traveling speed. 4-We found that VeDBA did not accurately predict the total energy expended by fur seals during their full foraging trips (R2 = 0.36). However, the accuracy of VeDBA as a predictor of total energy expenditure increased significantly when foraging trips were partitioned by activity and used activity-specific VeDBA paired with time activity budgets (R2 = 0.70). Activity-specific VeDBA also accurately predicted the energy expenditures of each activity independent of each other (R2 > 0.85). 5-Our study confirms that acceleration is a promising way to estimate energy expenditures of free-ranging marine mammals at a fine scale never attained before. However, it shows that it needs to be based on the time-activity budget that make up foraging trips rather than being derived as a single measure of VeDBA applied to entire foraging trips. Our activity-based method provides a cost-effective means to accurately calculate energy expenditures of fur seals using acceleration and time-activity budgets, a stepping stone for numerous other research fields.

keywords     Antarctic fur seal, Arctocephalus gazella, Callorhinus ursinus, diving, energy expenditure, foraging, metabolic rate, northern fur seal, time-activity budget
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Reproductive success is energetically linked to foraging efficiency in Antarctic fur seals.
Jeanniard-du-Dot, T., A.W. Trites, J.P. Arnould, and C. Guinet. 2017.
PLoS ONE. 12:e0174001
abstract
The efficiency with which individuals extract energy from their environment defines their survival and reproductive success, and thus their selective contribution to the population. Individuals that forage more efficiently (i.e., when energy gained exceeds energy expended) are likely to be more successful at raising viable offspring than individuals that forage less efficiently. Our goal was to test this prediction in large long-lived mammals under free-ranging conditions. To do so, we equipped 20 lactating Antarctic fur seals (Arctocephalus gazella) breeding on Kerguelen Island in the Southern Ocean with tags that recorded GPS locations, depth and tri-axial acceleration to determine at-sea behaviours and detailed time-activity budgets during their foraging trips. We also simultaneously measured energy spent at sea using the doubly-labeled water (DLW) method, and estimated the energy acquired while foraging from 1) type and energy content of prey species present in scat remains, and 2) numbers of prey capture attempts determined from head acceleration. Finally, we followed the growth of 36 pups from birth until weaning (of which 20 were the offspring of our 20 tracked mothers), and used the relative differences in body mass of pups at weaning as an index of first year survival and thus the reproductive success of their mothers. Our results show that females with greater foraging efficiencies produced relatively bigger pups at weaning. These mothers achieved greater foraging efficiency by extracting more energy per minute of diving rather than by reducing energy expenditure. This strategy also resulted in the females spending less time diving and less time overall at sea, which allowed them to deliver higher quality milk to their pups, or allowed their pups to suckle more frequently, or both. The linkage we demonstrate between reproductive success and the quality of individuals as foragers provides an individual-based quantitative framework to investigate how changes in the availability and accessibility of prey can affect fitness of animals.

keywords     foraging, energetics, pups, growth, biologging, doubly-labeled water, Antarctic fur seal, Arctocephalus gazella
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Activity-specific metabolic rates for diving, transiting and resting at sea can be estimated from time-activity budgets in free-ranging marine mammals.
Jeanniard-du-Dot, T., A.W. Trites, J.P.Y. Arnould, and C. Guinet. 2017.
Ecology and Evolution 2017:1-8.
abstract
Time and energy are the two most important currencies in animal bioenergetics. How much time animals spend engaged in different activities with specific energetic costs ultimately defines their likelihood of surviving and successfully reproducing. However, it is extremely difficult to determine the energetic costs of independent activities for free-ranging animals. In this study, we developed a new method to calculate activity-specific metabolic rates, and applied it to female fur seals. We attached biologgers (that recorded GPS locations, depth profiles, and triaxial acceleration) to 12 northern (Callorhinus ursinus) and 13 Antarctic fur seals (Arctocephalus gazella), and used a hierarchical decision tree algorithm to determine time allocation between diving, transiting, resting, and performing slow movements at the surface (grooming, etc.). We concomitantly measured the total energy expenditure using the doubly-labelled water method. We used a general least-square model to establish the relationship between time-activity budgets and the total energy spent by each individual during their foraging trip to predict activity-specific metabolic rates. Results show that both species allocated similar time to diving (~29%), transiting to and from their foraging grounds (~26-30%), and resting (~8-11%). However, Antarctic fur seals spent significantly more time grooming and moving slowly at the surface than northern fur seals (36% vs. 29%). Diving was the most expensive activity (~30 MJ/day if done non-stop for 24 hr), followed by transiting at the surface (~21 MJ/day). Interestingly, metabolic rates were similar between species while on land or while slowly moving at the surface (~13 MJ/day). Overall, the average field metabolic rate was ~20 MJ/day (for all activities combined). The method we developed to calculate activity-specific metabolic rates can be applied to terrestrial and marine species to determine the energetic costs of daily activities, as well as to predict the energetic consequences for animals forced to change their time allocations in response to environmental shifts.

keywords     Antarctic fur seal, Arctocephalus gazella, Callorhinus ursinus, diving, energy expenditure, foraging, metabolic rate, northern fur seal, time-activity budget
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Combining hard-part and DNA analyses in scats with biologging and stable isotopes can reveal different diet compositions and feeding strategies within a population.
Jeanniard-du-Dot, T., A. C. Thomas, Y. Cherel, A. W. Trites and C. Guinet. 2017.
Marine Ecology Progress Series 584:1-16.
abstract
Accurately estimating predators' diets at relevant spatial and temporal scales is key to understanding animals' energetics and fitness, particularly in populations whose decline might be related to their diet such as northern fur seals Callorhinus ursinus. Our goals were to improve the accuracy of diet estimates and extend understanding of feeding ecology by combining 2 scat-based methods of diet determination (hard-part identification and DNA-metabarcoding) with stable isotope measurements and individual behavioural data. We collected 98 scats on a northern fur seal breeding colony. We also tracked 20 females with biologgers, and took blood samples to determine δ13C and δ15N values as proxies for seal foraging habitat and diet. Results show that diet composition from hard-parts analysis corresponded well with DNA results, with DNA yielding a greater diversity of prey species at a finer taxonomic level. Overall, scat-based methods showed that seals mostly fed on neritic shelf-associated prey. Cluster analyses of combined hard-parts and DNA results however identified 2 diet groups, one mostly neritic and the other mostly pelagic. Stable isotopes and behavioural data revealed that 40% of seals fed in oceanic waters on pelagic prey. This is more than indicated by scat-based analyses, which are likely biased towards animals foraging closest to the colony and underestimate some dietary specializations within the population. Consequently, the combination of multiple methods for diet identification with at-sea tracking of individuals can help identify and quantify specialist groups within a population and provide a wider spatial and temporal ecological context for dietary analysis.
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Physiological constraints and energetic costs of diving behaviour in marine mammals: a review of studies using trained Steller sea lions diving in the open ocean.
Rosen, D.A.S., A.G. Hindle, C. Gerlinsky, E. Goundie, G.D. Hastie and A.W. Trites. 2017.
Journal of Comparative Physiology B 187:29-50.
abstract
Marine mammals are characterized as having physiological specializations that maximize the use of oxygen stores to prolong time spent under water. However, it has been difficult to undertake the requisite controlled studies to determine the physiological limitations and trade-offs that marine mammals face while diving in the wild under varying environmental and nutritional conditions. For the past decade, Steller sea lions (Eumetopias jubatus) trained to swim and dive in the open ocean away from the physical confines of pools participated in studies that investigated the interactions between diving behaviour, energetic costs, physiological constraints, and prey availability. Many of these studies measured the cost of diving to understand how it varies with behaviour and environmental and physiological conditions. Collectively, these studies show that the type of diving (dive bouts or single dives), the level of underwater activity, the depth and duration of dives, and the n utritional status and physical condition of the animal affect the cost of diving and foraging. They show that dive depth, dive and surface duration, and the type of dive result in physiological adjustments (heart rate, gas exchange) that may be independent of energy expenditure. They also demonstrate that changes in prey abundance and nutritional status cause sea lions to alter the balance between time spent at the surface acquiring oxygen (and offloading CO2 and other metabolic by-products) and time spent at depth acquiring prey. These new insights into the physiological basis of diving behaviour further our understanding of the potential scope for behavioural responses of marine mammals to environmental changes, the energetic significance of these adjustments, and the consequences of approaching physiological limits.
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Harbour Seals Target Juvenile Salmon of Conservation Concern.
Thomas, A. C., B. W. Nelson, M. M. Lance, B. E. Deagle and A. W. & Trites. 2017.
Canadian Journal of Fisheries and Aquatic Sciences 74:907-921.
abstract
Knowing the species and life stages of prey that predators consume is important for understanding the impacts that predation may have on prey populations, but traditional methods for determining diets often cannot provide sufficient detail. We combined data from two methods of scat analysis (DNA metabarcoding and morphological prey ID) to quantify the species and life stages of salmon (Oncorhynchus spp.) consumed by harbour seals (Phoca vitulina) in the Strait of Georgia, Canada, where juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon survival is poor. Harbour seals primarily consumed adult salmon of lesser conservation concern in the fall (August-November): chum (Oncorhynchus keta: 18.4%), pink (Oncorhynchus gorbuscha: 12.6%), sockeye (Oncorhynchus nerka: 7.4%), Chinook (7.1%), and coho (1.8%). However, the opposite species trend occurred during the spring when seals preferred juvenile salmon of greater conservation concern (April july): coho (2.9%), Chinook (2.9%), sockeye (2.5%), pink (1.4%), and chum (0.8%)percentages that can equate to many individuals consumed. Our data suggest that harbour seals select juveniles of salmon species that out-migrate at ages >1 year and provide evidence of a potential causal relationship between harbour seal predation and juvenile salmon survival trends.

keywords     seals, predation, salmon, coho, Chinook, diet
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Marine mammals exploring the oceans pole to pole: a review of the MEOP consortium.
Treasure, A. M., F. Roquet, I. J. Ansorge, M. N. Bester, L. Boehme, H. Bornemann, J.-B. Charrassin, D. Chevallier, D. P. Costa, M. A. Fedak, C. Guinet, M. O. Hammill, R. G. Harcourt, M. A. Hindell, K. M. Kovacs, M.-A. Lea, P. Lovell, A. D. Lowther, C. Lydersen, T. McIntyre, C. R. McMahon, M. M. C. Muelbert, K. Nicholls, B. Picard, G. Reverdin, A. W. Trites, G. D. Williams and P.J. Nico de Bruyn. 2017.
Oceanography 30:132-138.
abstract
Polar oceans are poorly monitored despite the important role they play in regulating Earth's climate system. Marine mammals equipped with biologging devices are now being used to fill the data gaps in these logistically difficult to sample regions. Since 2002, instrumented animals have been generating exceptionally large data sets of oceanographic CTD casts (>500,000 profiles), which are now freely available to the scientific community through the MEOP data portal (http://meop.net). MEOP (Marine Mammals Exploring the Oceans Pole to Pole) is a consortium of international researchers dedicated to sharing animal-derived data and knowledge about the polar oceans. Collectively, MEOP demonstrates the power and cost-effectiveness of using marine mammals as data-collection platforms that can dramatically improve the ocean observing system for biological and physical oceanographers. Here, we review the MEOP program and database to bring it to the attention of the international community.
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Fine-scale foraging movements by fish-eating killer whales (Orcinus orca) relate to the vertical distributions and escape responses of salmonid prey (Oncorhynchus spp.).
Wright, B. M., J. K. B. Ford, G. M. Ellis, V. B. Deecke, A. D. Shapiro, B. C. Battaile and A. W. Trites. 2017.
Movement Ecology 5:1-18.
abstract
Background: We sought to quantitatively describe the fine-scale foraging behavior of northern resident killer whales (Orcinus orcas), a population of fish-eating killer whales that feeds almost exclusively on Pacific salmon (Oncorhynchus spp.). To reconstruct the underwater movements of these specialist predators, we deployed 34 biologging Dtags on 32 individuals and collected high-resolution, three-dimensional accelerometry and acoustic data. We used the resulting dive paths to compare killer whale foraging behavior to the distributions of different salmonid prey species. Understanding the foraging movements of these threatened predators is important from a conservation standpoint, since prey availability has been identified as a limiting factor in their population dynamics and recovery. Results: Three-dimensional dive tracks indicated that foraging (N = 701) and non-foraging dives (N = 10,618) were kinematically distinct (Wilks

keywords     Foraging, Movement, Diving behavior, Biologging, Dtag, Accelerometry, Killer whale, Orcinus orca, Pacific salmon
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2016
 
Net energy gained by northern fur seals (Callorhinus ursinus) is impacted more by diet quality than by diet diversity.
Diaz Gomez, M, D.A.S. Rosen and A.W. Trites. 2016.
Canadian Journal of Zoology 94:123-135.
abstract
Understanding whether northern fur seals (Callorhinus ursinus (L., 1758)) are negatively affected by changes in prey quality or diversity could provide insights into their on-going population decline in the central Bering Sea. We investigated how six captive female fur seals assimilated energy from eight different diets consisting of four prey species (walleye pollock (Gadus chalcogrammus Pallas, 1814, formerly Theragra chalcogrammus (Pallas, 1814)), Pacific herring (Clupea pallasii Valenciennes in Cuvier and Valenciennes, 1847), capelin (Mallotus villosus (Muller, 1776)), and magister armhook squid (Berryteuthis magister (Berry, 1913))) fed alone or in combination. Net energy was quantified by measuring fecal energy loss, urinary energy loss, and heat increment of feeding. Digestible energy (95.9%-96.7%) was high (reflecting low fecal energy loss) and was negatively affected by ingested mass and dietary protein content. Urinary energy loss (9.3%-26.7%) increased significantly for high-protein diets. Heat increment of feeding (4.3%-12.4%) was significantly lower for high-lipid diets. Overall, net energy gain (57.9%-83.0%) was affected by lipid content and varied significantly across diets. Mixed-species diets did not provide any energetic benefit over single-species diets. Our study demonstrates that diet quality was more important in terms of energy gain than diet diversity. These findings suggest that fur seals consuming low-quality prey in the Bering Sea would be more challenged to obtain sufficient energy to satisfy energetic and metabolic demands, independent of high prey abundance.

keywords     northern fur seal, Callorhinus ursinus, net energy, mixed-species diets, diet quality
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Dive, food, and exercise effects on blood microparticles in Steller sea lions (Eumetopias jubatus): exploring a biomarker for decompression sickness.
Fahlman, A., M.J. Moore, A.W. Trites, D.A. Rosen, M. Haulena, N. Waller, T. Neale, M. Yang and S.R. Thom. 2016.
American Journal of Physiology-Regulatory, Integrative and Comparative Physiology 310:R596-R601.
abstract
Recent studies of stranded marine mammals indicate that exposure to underwater military sonar may induce pathophysiological responses consistent with decompression sickness (DCS). However, DCS has been difficult to diagnose in marine mammals. We investigated whether blood microparticles (MPs, measured as number/l plasma), which increase in response to decompression stress in terrestrial mammals, are a suitable biomarker for DCS in marine mammals. We obtained blood samples from trained Steller sea lions (Eumetopias jubatus, 4 adult females) wearing time-depth recorders that dove to predetermined depths (either 5 or 50 meters). We hypothesized that MPs would be positively related to decompression stress (depth and duration underwater). We also tested the effect of feeding and exercise in isolation on MPs using the same blood sampling protocol. We found that feeding and exercise had no effect on blood MP levels, but that diving caused MPs to increase. However, blood MP levels did not correlate with diving depth, relative time underwater, and presumed decompression stress, possibly indicating acclimation following repeated exposure to depth.
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Flipper strokes can predict energy expenditure and locomotion costs in free-ranging northern and Antarctic fur seals.
Jeanniard du Dot, T., A.W. Trites J.P.Y. Arnould, and C. Guinet. 2016.
Scientific Reports. 6:33912
abstract
Flipper strokes have been proposed as proxies to estimate the energy expended by marine vertebrates while foraging at sea, but this has not been validated on free-ranging otariids (fur seals and sea lions). Our goal was to investigate how well flipper strokes correlate with energy expenditure in 33 foraging northern and Antarctic fur seals equipped with accelerometers, GPS, and time-depth recorders. We concomitantly measured field metabolic rates with the doubly-labeled water method and derived activity-specific energy expenditures using fine-scale time-activity budgets for each seal. Flipper strokes were detected while diving or surface transiting using dynamic acceleration. Despite some inter-species differences in flipper stroke dynamics or frequencies, both species of fur seals spent 3.79 ± 0.39 J/kg per stroke and had a cost of transport of ~1.6-1.9 J/kg/m while diving. Also, flipper stroke counts were good predictors of energy spent while diving (R2 = 0.76) and to a lesser extent while transiting (R2 = 0.63). However, flipper stroke count was a poor predictor overall of total energy spent during a full foraging trip (R2 = 0.50). Amplitude of flipper strokes (i.e., acceleration amplitude x number of strokes) predicted total energy expenditure (R2 = 0.63) better than flipper stroke counts, but was not as accurate as other acceleration-based proxies, i.e. Overall Dynamic Body Acceleration.

keywords     accelerometer, energy expenditure, field metabolic rate, doubly-labelled-water, flipper strokes, cost of transport, ODBA, VeDBA, northern fur seal, Antarctic fur seal
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Bayesian data fusion approaches to predicting spatial tracks: application to marine mammals.
Liu, Y., J. V. Zidek, A. W. Trites and B. C. Battaile. 2016.
Annals of Applied Statistics 10:1517-1546.
abstract
Bayesian Melding (BM) and downscaling are two Bayesian approaches commonly used to combine data from different sources for statistical inference. We extend these two approaches to combine accurate but sparse direct observations with another set of high-resolution but biased calculated observations. We use our methods to estimate the path of a moving or evolving object and apply them in a case study of tracking northern fur seals. To make the BM approach computationally feasible for high dimensional (big) data, we exploit the properties of the processes along with approximations to the likelihood to break the high dimensional problem into a series of lower dimensional problems. To implement the alternative, downscaling approach, we use R-INLA to connect the two sources of observations via a linear mixed effect model. We compare the predictions of the two approaches by cross-validation as well as simulations. Our results show that both approaches yield similar results— both provide accurate, high resolution estimates of the atea locations of the northern fur seals, as well as Bayesian credible intervals to characterize the uncertainty about the estimated movement paths.

keywords     Bayesian Melding, Downscaling, Bio-logging, Conditional independence, INLA, Dead-Reckoning, Tracking, Marine mammals
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Behavioral responses affect distribution analyses of bowhead whales in the vicinity of seismic operations.
Robertson, F.C., W.R. Koski and A.W. Trites. 2016.
Mar Ecol Prog Ser 549:243-262.
abstract
Aerial surveys are sometimes used to assess the densities of wide-ranging whales, as well as changes in their distributions in response to human activity. Such surveys also provide data used to estimate numbers of animals exposed to different received levels of seismic sound, as required by regulators. However, estimates of abundance are often biased because they fail to account for the effects of seismic operations on the surfacing and diving behavior of whales. Our objective was to determine the extent to which analyses of the distribution of bowhead whales Balaena mysticetus are affected by changes in visual 'availability' caused by seismic operations. We used aerial survey data collected during seismic operations in the Alaskan Beaufort Sea from late August to early October 2008 and fit spatial density surface models to bowhead sighting data to predict whale density in an ensonified area. We also incorporated availability correction factors to determine the sensitivity of density estimates to changes in surfacing and diving behavior caused by seismic operations. The influence of altered whale behavior was then evaluated by comparing a series of realistic simulated scenarios in which models incorporated undisturbed or seismic disturbance-related correction factors. Results suggest that the numbers of bowhead whales present in the vicinity of seismic operations during the bowhead autumn migration are underestimated if the behavioral effects of seismic operations on whales are ignored. Our study highlights the importance of accounting for changes in whale behavior that can affect sightability when estimating numbers and distribution of whales in the vicinity of industrial activity.

keywords     Bowhead whale, Seismic survey, Distance sampling, Beaufort Sea, Availability, g(0), Alaska, Spatial models, Behavior, Generalized additive model
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Quantitative DNA metabarcoding: improved estimates of species proportional biomass using correction factors derived from control material.
Thomas, A. C., B. E. Deagle, P. J. Eveson, C. H. Harsch and A. W. Trites. 2016.
Molecular Ecology Resources 16:714-726.
abstract
DNA metabarcoding is a powerful new tool allowing characterization of species assemblages using high-throughput amplicon sequencing. The utility of DNA metabarcoding for quantifying relative species abundances is currently limited by both biological and technical biases which influence sequence read counts. We tested the idea of sequencing 50/50 mixtures of target species and a control species in order to generate relative correction factors (RCFs) that account for multiple sources of bias and are applicable to field studies. RCFs will be most effective if they are not affected by input mass ratio or co-occurring species. In a model experiment involving three target fish species and a fixed control, we found RCFs did vary with input ratio but in a consistent fashion, and that 50/50 RCFs applied to DNA sequence counts from various mixtures of the target species still greatly improved relative abundance estimates (e.g., average per species error of 19 ± 8% for uncorrected versu s 3 ± 1% for corrected estimates). To demonstrate the use of correction factors in a field setting, we calculated 50/50 RCFs for 18 harbour seal (Phoca vitulina) prey species (RCFs ranging from 0.68 to 3.68). Applying these corrections to field-collected seal scats affected species percentages from individual samples (Δ 6.7 ± 6.6%) more than population level species estimates (Δ 1.7 ± 1.2%). Our results indicate that the 50/50 RCF approach is an effective tool for evaluating and correcting biases in DNA metabarcoding studies. The decision to apply correction factors will be influenced by the feasibility of creating tissue mixtures for the target species, and the level of accuracy needed to meet research objectives.

keywords     DNA metabarcoding, high-throughput amplicon sequencing, harbor seal, Phoca vitulina, diets, prey consumption, diet reconstruction, scats, fecal samples
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One-two punches to eliminate depredation by marine mammals on fish caught or raised for human consumption.
Trites, A. W. and J. Spitz. 2016.
Animal Conservation 19:222-224.
abstract
The ultimate solution to protecting fish farms and fishing gear from marine mammals is not yet at hand - and there is unlikely to be a one-size-fits-all solution. Protecting fish raised in open-ocean meshed pens will likely prove to be a two-stepped process that begins with using physical barriers around pens to prevent predators from obtaining the fish (such as predator exclusion nets) - and turning to sound (such as acoustic deterrence) as the second step to quickly push back any individuals that breach the protective perimeter. Some capture fisheries may be able to protect their catches using barriers (such as traps instead of hooks) or using smart fishing techniques (such as shorter soak times, or modified hauling techniques), while others might find electrified nets and acoustic deterrence are effective in scaring predators in the short-term. Unfortunately, all technologically-based deterrence methods are likely to fail in the long-term as animals adapt to prolonged stimulus and find the rewards they receive to be greater than the price they pay to obtain them. New technologies often also equate to new problems and conflicts - it is just that no one knows yet what they are until the technology has been fully implemented. Thus, simple (but perhaps initially expensive) options that prevent predators from seeing or accessing the fish intended for human consumption are likely to be the most successful, while the technologically based solutions are likely to be most successful when used sparingly. Using one-two punch solutions that combine the two methods would seem to have the greatest likelihood of successfully reducing or removing conflicts between fisheries and marine mammals. They may also ultimately yield the peace of mind that society and those whose livelihoods depend on harvesting marine species seek to ensure t hat humans can co-exist with marine mammals with minimal conflict.

keywords     depredation, marine mammals, fisheries, fish farms, acoustic deterrence, harbor seal, harbor porpoise
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Transiting to depth disrupts the relationship between overall dynamic body acceleration and oxygen consumption in freely diving Steller sea lions.
Volpov, B.L., E.T. Goundie, D.A.S. Rosen, A.W. Trites and J.P.Y. Arnould. 2016.
Marine Ecology Progress Series 562:221-236.
abstract
Previous research has presented contradictory evidence on the ability of overall dynamic body acceleration (ODBA) to predict oxygen consumption (sV̇O2) in air-breathing diving vertebrates. We investigated a potential source of these discrepancies by partitioning the ODBA: sV̇O2 relationship over 3 phases of the dive cycle (transiting to and from depth, bottom time, and post-dive surface interval). Trained Steller sea lions (Eumetopias jubatus) executed 4 types of dives to 40 m (single dives, long-duration dive bouts of 4-6 dives, short-duration dive bouts of 10 or 12 dives, and transit dives with minimal bottom duration). Partitioning single dives by dive phase showed differing patterns in the ODBA: sV̇O2 relationship among dive phases, but no significant linear relationships were observed. The proportion of the dive cycle spent transiting to and from the surface was a significant predictive factor in the ODBA: sV̇O2 relationship, while bottom duration or post-dive surface interval had no effect. ODBA only predicted sV̇O2 for dives when the proportion of time spent transiting was small. The apparent inability of ODBA to reliably predict sV̇O2 reflects differences in the inherent relationships between ODBA and sV̇O2 during different phases of the dive. These results support the growing body of evidence that ODBA on its own is not a reliable field predictor of energy expenditure at the level of the single dive or dive bout in air-breathing diving vertebrates likely because ODBA (a physical measure) cannot account for physiological changes in sV̇O2 that occur during the different phases of a dive cycle.

keywords     diving behaviour, metabolic rate, ODBA, dive phase, pinniped
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Averaged propulsive body acceleration (APBA) can be calculated from biologging tags that incorporate gyroscopes and accelerometers to estimate swimming speed, hydrodynamic drag and energy expenditure for Steller sea lions.
Ware, C., A. W. Trites, D. A. S. Rosen and J. Potvin. 2016.
PLoS ONE 11(6): e0157326
abstract
Forces due to propulsion should approximate forces due to hydrodynamic drag for animals horizontally swimming at a constant speed with negligible buoyancy forces. Propulsive forces should also correlate with energy expenditures associated with locomotion預n important cost of foraging. As such, biologging tags containing accelerometers are being used to generate proxies for animal energy expenditures despite being unable to distinguish rotational movements from linear movements. However, recent miniaturizations of gyroscopes offer the possibility of resolving this shortcoming and obtaining better estimates of body accelerations of swimming animals. We derived accelerations using gyroscope data for swimming Steller sea lions (Eumetopias jubatus), and determined how well the measured accelerations correlated with actual swimming speeds and with theoretical drag. We also compared dive averaged dynamic body acceleration estimates that incorporate gyroscope data, with the widely used Overa ll Dynamic Body Acceleration (ODBA) metric, which does not use gyroscope data. Four Steller sea lions equipped with biologging tags were trained to swim alongside a boat cruising at steady speeds in the range of 4 to 10 kph. At each speed, and for each dive, we computed a measure called Gyro-Informed Dynamic Acceleration (GIDA) using a method incorporating gyroscope data with accelerometer data. We derived a new metric輸veraged Propulsive Body Acceleration (APBA), which is the average gain in speed per flipper stroke divided by mean stroke cycle duration. Our results show that the gyro-based measure (APBA) is a better predictor of speed than ODBA. We also found that APBA can estimate average thrust production during a single stroke-glide cycle, and can be used to estimate energy expended during swimming. The gyroscope-derived methods we describe should be generally applicable in swimming animals where propulsive accelerations can be clearly identified in the signal預nd they should also prove useful for dead-reckoning and improving estimates of energy expenditures from locomotion.

keywords     biologging, ODBA, accelerometer, gyroscope, swimming, speed, energy expenditure, drag, stroke
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2015
 
Foraging a new trail with northern fur seals (Callorhinus ursinus): Lactating seals from islands with contrasting population dynamics have different foraging strategies, and forage at scales previously unrecognized by GPS interpolated dive data.
Battaile, B.C., C.A. Nordstrom, N. Liebsch and A.W. Trites. 2015.
Marine Mammal Science 31:1494-1520.
abstract
We reconstructed the foraging tracks of lactating northern fur seals (Callorhinus ursinus) from two eastern Bering Sea islands (St. Paul Island and Bogoslof Island) using linear interpolation between GPS locations recorded at a maximum of four times per hour and compared it to tri-axial accelerometer and magnetometer data collected at 16 Hz to reconstruct pseudotracks between the GPS fixes. The high-resolution data revealed distances swum per foraging trip were much greater than the distances calculated using linearly interpolated GPS tracks (1.5 times further for St. Paul fur seals and 1.9 times further for Bogoslof fur seals). First passage time metrics calculated from the high resolution data revealed that the optimal scale at which the seals searched for prey was 500 m (radius of circle searched) for fur seals from St. Paul Island that went off-shelf, and 50 m for fur seals from Bogoslof Island and surprisingly, 50 m for fur seals from St. Paul that foraged on-s helf. These area-restricted search scales were significantly smaller than those calculated from GPS data alone (12 km for St. Paul and 6 km for Bogoslof) indicating that higher resolution movement data can reveal novel information about foraging behaviors that have important ecological implications.

keywords     foraging ecology, biologging, northern fur seal, Callorhinus ursinus, marine mammal, Bering Sea, magnetometer, accelerometer, spatial analysis, area restricted search
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Accelerometers identify new behaviors and show little difference in the activity budgets of lactating northern fur seals (Callorhinus ursinus) between breeding islands and foraging habitats in the eastern Bering Sea.
Battaile, B.C., K.Q. Sakamoto, C.A. Nordstrom, D.A.S. Rosen and A.W. Trites. 2015.
PLoS ONE Vol 10(3):e0118761
abstract
We tagged 82 lactating northern fur seals (Callorhinus ursinus) with tri-axial accelerometers and magnetometers on two eastern Bering Sea islands (Bogoslof and St. Paul) with contrasting population trajectories. Using depth data, accelerometer data and spectral analysis we classified time spent diving (30%), resting (~7%), shaking and grooming their pelage (9%), swimming in the prone position (~10%) and two types of previously undocumented rolling behavior (29%), with the remaining time (~15%) unspecified. The reason for the extensive rolling behavior is not known. We ground-truthed the accelerometry signals for shaking and grooming and rolling behaviors—and identified the acceleration signal for porpoising—by filming tagged northern fur seals in captivity. Speeds from GPS interpolated data indicated that animals traveled fastest while in the prone position, suggesting that this behavior is indicative of destination-based swimming. Very little difference was found in the percentages of time spent in the categorical behaviors with respect to breeding islands (Bogoslof or St. Paul Island), forager type (cathemeral or nocturnal), and the region where the animals foraged (primarily on-shelf <200m, or off-shelf > 200m). The lack of significant differences between islands, regions and forager type may indicate that behaviors summarized over a trip are somewhat hardwired even though foraging trip length and when and where animals dive are known to vary with island, forager type and region.

keywords     seals, accelerometers, animal behavior, foraging, biological locomotion, sine wave, fur seal
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Resting metabolic rate and activity: Key components of seasonal variation in daily energy expenditure for the northern fur seal (Callorhinus ursinus).
Dalton, A. J. M., D. A. S. Rosen and A.W Trites. 2015.
Canadian Journal of Zoology 93(8):635-644.
abstract
Seasonal changes in daily energy expenditure (DEE) and its key underlying components (costs of resting metabolic rate (RMR), thermoregulation, activity, and growth) were measured to determine seasonal energy requirements, bioenergetic priorities, and potential times of year when unpredicted episodes of nutritional stress would have their greatest effect on female northern fur seals (Callorhinus ursinus L., 1758). The DEE of 6 captive juvenile female fur seals averaged 527.8 Ä… 65.7 kJ kg-1 d-1 (Ä… SD) and fluctuated seasonally (lower during summer and winter, and up to 20% greater in spring and fall). RMR also changed significantly with season, and was higher in the fall (potentially due to moulting or anticipated migratory activity). However, changes in RMR did not follow the same seasonal trend as those of DEE. The largest component of DEE was RMR (~ 80% on average), followed by the cost of activity (which may have driven some of the seasonal variations in DEE). In contrast, the energetic costs associated with growth and thermoregulation appeared negligible within the scope of overall energy expenditures. Elevated innate costs of RMR and higher growth rates in the fall and summer, respectively, suggest that inadequate nutrition could comparatively have greater negative effects on female fur seals during these seasons

keywords     northern fur seal, Callorhinus ursinus, daily energy expenditure,resting metabolic rate, activity, growth, thermoregulation
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Low prey abundance leads to less efficient foraging behaviour in Steller sea lions.
Goundie, E.T., D. A. S. Rosen and A.W. Trites. 2015.
Journal of Experimental Marine Biology and Ecology 470:70-77.
abstract
Breath-hold divers should adjust their dive behaviors to maximize the benefits and minimize the costs of foraging on prey patches of different densities at different depths. However, few studies have quantified how animals respond to changes in prey availability (depth and density), and how this affects their foraging efficiency. We tested the effects of changes in prey availability on the foraging behavior and efficiency of Steller sea lions (Eumetopias jubatus) by measuring diving metabolic rate, dive durations, and food intake of 4 trained sea lions diving in the open ocean on controlled prey patches of different densities at different depths. Sea lions completed bouts of 5 consecutive dives on high- or low-density prey patches at two depths (10m and 40m). We found that the rate of energy expenditure did not change under any of the imposed foraging conditions (meanąSD: 0.22ą0.02 kJ min−1 kg−1), but that the proportion of time spent consuming prey increased with prey patch density due to changes in diving patterns. At both depths, sea lions spent a greater proportion of the dive bout foraging on prey patches with high prey density, which led to high rates of energy gain (4.3 ą 0.96 kJ min−1 kg−1) and high foraging efficiency (cost:benefit was 1:20). In contrast, the sea lions spent a smaller proportion of their dive bout actively feeding on prey patches with low prey density, and consequently had a lower energetic gain (0.91 ą 0.29 kJ min−1 kg−1) and foraging efficiency (1:4). The 5-fold differences in foraging efficiency between the two types of prey patches were greater than the 3-fold differences that we expected based on differences in food availability. Our results suggest that sea lions faced with reduced prey availability forage less efficiently and therefore would have greater difficulty obtaining their daily energy requirements.

keywords     Dive behavior, Diving energetics, Foraging efficiency, Optimal foraging, Steller sea lion
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Assessment of competition between fisheries and Steller sea lions in Alaska based on estimated prey biomass, fisheries removals and predator foraging behaviour.
Hui, T.C.Y., R. Gryba, E.J. Gregr and A.W. Trites. 2015.
PLoS ONE Vol 10(5): e0123786
abstract
A leading hypothesis to explain the dramatic decline of Steller sea lions (Eumetopias jubatus) in western Alaska during the latter part of the 20th century is a change in prey availability due to commercial fisheries. We tested this hypothesis by exploring the relationships between sea lion population trends, fishery catches, and the prey biomass accessible to sea lions around 33 rookeries between 2000 and 2008. We focused on three commercially important species that have dominated the sea lion diet during the population decline: walleye pollock, Pacific cod and Atka mackerel. We estimated available prey biomass by removing fishery catches from predicted prey biomass distributions in the Aleutian Islands, Bering Sea and Gulf of Alaska; and modelled the likelihood of sea lions foraging at different distances from rookeries (accessibility) using satellite telemetry locations of tracked animals. We combined this accessibility model with the prey distributions to estima te the prey biomass accessible to sea lions by rookery. For each rookery, we compared sea lion population change to accessible prey biomass. Of 304 comparisons, we found 3 statistically significant relationships, all suggesting that sea lion populations increased with increasing prey accessibility. Given that the majority of comparisons showed no significant effect, it seems unlikely that the availability of pollock, cod or Atka mackerel was limiting sea lion populations in the 2000s.

keywords     Eumetopias jubatus, walleye pollock, Pacific cod, Atka mackerel, accessibility, prey distribution, CPUE, linear mixed-effects models
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Linking northern fur seal dive behaviour to environmental variables in the eastern Bering Sea.
Joy, R., M.G. Dowd, B.C. Battaile, P.M. Lestenkof, J. T. Sterling, A.W. Trites and R.D. Routledge. 2015.
Ecosphere Vol 6(5) pp. 75
abstract
Northern fur seals (Callorhinus ursinus) breeding on the Pribilof Islands, Alaska have declined dramatically over the past 40 years. Effective conservation of northern fur seals depends on understanding the foraging behaviour of adult females whose foraging success is linked to pup survival. We determined the foraging behaviour for 11 tagged lactating female northern seals from the Pribilof Islands using a state-space modelling approach with an autoregressive movement model. To interpret at-sea behaviour in the context of oceanic habitat, we matched high-resolution reconstructed tracks spatially and temporally to a set of environmental covariates that included: commercial groundfish catch, sea surface temperature, primary productivity, wind speed, depth and time of day. We used a Bayesian hierarchical framework to implement a multinomial regression model to link behaviour to environmental covariates; and account for the mismatch of scale between fur seal behaviour and the environmental variables by incorporating an error-in-covariates approach into the hierarchical model. The Bayesian framework allowed us to build a single model to synthesize the information from all the northern fur seal foraging tracks and the available information about the underlying environmental conditions. Application of the approach indicated that the behavioural states for the northern fur seal were significantly related to the Alaska commercial groundfish catch, particularly walleye pollock (Gadus chalogramma).

keywords     northern fur seal, Bayesian hierarchical model, error-in-covariates, diel pattern, juvenile walleye pollock
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Bias correction and uncertainty characterization of dead-reckoned paths of marine mammals.
Liu, Y., B.C. Battaile, A.W. Trites and J.V. Zidek. 2015.
Animal Biotelemetry 3(51):1-11.
abstract
Biologgers incorporating triaxial magnetometers and accelerometers can record animal movements at infra-second frequencies. Such data allow the Dead-Reckoned (DR) path of an animal to be reconstructed at high-resolution. However, poor measures of speed,undocumented movements caused by ocean currents, confounding between movement and gravitational acceleration and measurement error in the sensors, limits the accuracy and precision of DR paths. The conventional method for calculating DR paths attempts to reduce random errors and systematic biases using GPS observations without rigorous statistical justification or quantification of uncertainty in the derived swimming paths. Methods: We developed a Bayesian Melding (BM) approach to characterize uncertainty and correct for bias of DR paths. Our method used a Brownian Bridge process to combine the fine-resolution (but seriously biased) DR path and the sparse (but precise and accurate) GPS measurements in a statistically rigorous way. We also exploited the properties of underlying processes and some approximations to the likelihood to dramatically reduce the computational burden of handling large, high-resolution data sets. We implemented this approach in an R package "BayesianAnimalTracker", and applied it to biologging data obtained from northern fur seals (Callorhinus ursinus) foraging in the Bering Sea. We also tested the accuracy of our method using cross-validation analysis and compared it to the conventional bias correction of DR and linear interpolation between GPS observations (connecting two consecutive GPS observations by a straight line). Results: Our BM approach yielded accurate, high-resolution estimated paths with uncertainty quantified as credible intervals. Cross-validation analysis demonstrated the greater prediction accuracy of the BM method to reconstruct movements versus the conventional and linear interpolation methods. Moreover, the credible intervals covered the true path points albeit with probabilities somewhat higher than 95%. The GPS corrected high-resolution path also revealed that the total distance traveled by the northern fur seals we tracked was 40% - 50% further than that calculated by linear interpolation of the GPS observations.

keywords     Biologging; Dead-Reckoning; High-resolution animal tracking; Bayesian melding; energy expenditure; Global Positioning System; uncertainty statement; Brownian Bridge
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Feeding kinematics and performance of basal otariid pinnipeds, Steller sea lions and northern fur seals: implications for the evolution of mammalian feeding.
Marshall, C. D., D. A. S. Rosen and A. W. Trites. 2015.
Journal of Experimental Biology 218:3229-3240.
abstract
Feeding performance studies can address questions relevant to feeding ecology and evolution. Our current understanding of feeding mechanisms for aquatic mammals is poor. Therefore, we characterized the feeding kinematics and performance of five Steller sea lions (Eumetopias jubatus) and six northern fur seals (Callorhinus ursinus). We tested the hypotheses that both species use suction as their primary feeding mode, and that rapid jaw opening was related to suction generation. Steller sea lions used suction as their primary feeding mode, but also used a biting feeding mode. In contrast, northern fur seals only used a biting feeding mode. Kinematic profiles of Steller sea lions were all indicative of suction feeding (i.e. a small gape, small gape angle, large depression of the hyolingual apparatus and lip pursing). However, jaw opening as measured by gape angle opening velocity (GAOV) was relatively slow in Steller sea lions. In contrast to Steller sea lions, the GAOV of northern fur seals was extremely fast, but their kinematic profiles indicated a biting feeding mode (i.e. northern fur seals exhibited a greater gape, a greater gape angle and minimal depression of the hyolingual apparatus compared with Steller sea lions). Steller sea lions produced both subambient and suprambient pressures at 45 kPa. In contrast, northern fur seals produced no detectable pressure measurements. Steller sea lions have a broader feeding repertoire than northern fur seals, which likely enables them to feed on a greater variety of prey, in more diverse habitats. Based on the basal phylogenetic position of northern fur seals, craniodental morphological data of the Callorhinus lineage, and the performance data provided in this study, we suggest that northern fur seals may be exhibiting their ancestral feeding mode.

keywords     Otariidae, Callorhinus ursinus, Eumetopias jubatus,suction, biting, fossil pinnipeds
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Correction factors account for the availability of bowhead whales exposed to seismic operations in the Beaufort Sea.
Robertson, F.C., W.R. Koski, J.R. Brandon, T.A. Thomas, and A.W. Trites. 2015.
Journal of Cetacean Research and Management 15:35-44.
abstract
The accuracy of estimates of cetacean density from line-transect survey data depends in large part on how visible the target species is to the observer. Behavioural data (i.e. surface and dive times) from government- and industry-funded aerial observation programs (1980-2000) were used to calculate availability correction factors needed to estimate the number of bowhead whales (Balaena mysticetus) from aerial survey sighting data. Correction factors were calculated for bowheads exposed and not exposed to seismic operations. Travelling non-calf whales were found to be less likely to be available for detection than other whales, and their availability further declined in the presence of seismic operations. Non-calves were also less available to observers during autumn when exposed to seismic operations than when not exposed, regardless of activity (travelling or otherwise). Such differences in availability appear to reflect behavioural responses to the sound of seismi cooperations that alters the surfacing and diving patterns of bowhead whales. Localised abundance estimated from aerial surveys may range from 3% to as much as 63% higher in areas ensonified by seismic operations if correction factors are applied to account for differences in availability associated with the presence of seismic operations, compared to abundance estimates derived from assessments that only account for changes in availability of undisturbed whales. These results provide the first empirical estimates of availability for bowhead whales exposed to seismic operations and highlight the implications of not correcting for disturbance-related availability in density assessments in the vicinity of seismic operations.
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Evidence of partial deferment of digestion during diving in Steller sea lions (Eumetopias jubatus).
Rosen, D.A.S., C.D. Gerlinsky and A.W. Trites. 2015.
Journal of Experimental Marine Biology and Ecology 469:93-97.
abstract
Past foraging success of diving air-breathing vertebrates can adversely affect future foraging capabilities and costs through changes in circulation or increased metabolic costs associated with digestion that are incompatible with efficient diving. This study tested the physiological interaction between digestion and diving by comparing the cost of diving in fasted and pre-fed trained Steller sea lions foraging under controlled conditions in the open ocean. Pre-dive and post-dive surface metabolism and diving metabolic rate were all higher in the pre-fed animals than the fasted animals, indicating an effect of digestion on metabolism. However, the sea lions displayed a significant reduction in the apparent additive effect of digestion during diving. The increase in rate of oxygen consumption associated with digestion was reduced by 54% during diving compared to the increase observed in pre-dive metabolism. This truncation of the additional cost of digestion rapidly disappeared following cessation of diving. The results suggest that Steller sea lions diving to depth demonstrate a partial deferment of digestion while actively foraging and that the classically held view that digestion and diving are incompatible processes may be much more variable and adaptable to specific diving conditions and behaviors than previously thought.
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A nutrigenomic approach to detect nutritional stress from gene expression in blood samples drawn from Steller sea lions.
Spitz, J., V. Becquet, D.A.S. Rosen and A.W. Trites. 2015.
Comparative Biochemistry and Physiology: Part A 187:214-223.
abstract
Gene expression profiles are increasingly being used as biomarkers to detect the physiological responses of a number of species to disease, nutrition, and other stressors. However, little attention has been given to using gene expression to assess the stressors and physiological status of marine mammals. We sought to develop and validate a nutrigenomics approach to quantify nutritional stress in Steller sea lions (Eumetopias jubatus). We subjected 4 female Steller sea lions to 3 feeding regimes over 70-day trials (unrestricted food intake, acute nutritional stress, and chronic nutritional stress), and drew blood samples from each animal at the end of each feeding regime. We then extracted the RNA of white blood cells and measured the response of 8 genes known to react to diet restriction in terrestrial mammals. Overall, we found that the genomic response of Steller sea lions experiencing nutritional stress was consistent with diet restriction regulation in terrestrial mammals. Our nutritionally stressed sea lions down-regulated some cellular processes involved in immune response and oxidative stress, and up-regulated pro-inflammatory responses and metabolic processes. Nutrigenomics appears to be a promising means to monitor nutritional status and contribute to mitigation measures needed to assist in the recovery of Steller sea lions and other at-risk species of marine mammals.

keywords     Genomics, Expression profile, q-PCR, Diet, restriction, Biomarker, Monitoring
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Diet of Harbour seals Phoca vitulina: implication for the flatfish nursery in the Bay of Somme (English Channel, France).
Spitz, J., L. Dupuis, V. Becquet, B. Dubief and A.W. Trites. 2015.
Aquatic Living Resources 28:11-19.
abstract
Changes in marine species abundance can impact ecosystems’ stability and sustainability of fisheries. In the eastern Atlantic Ocean, harbour seals (Phoca vitulina) are top predator occupying highest trophic level in coastal marine food webs. Although, the overall European population decline, harbour seals have increased dramatically since the 1990Â’s at the southern limit of their European distribution along the French coast of the English Channel. However, little is known about the feeding habits of the expanding peripheral populations limiting the assessment of the role and the impact of this predator in these coastal ecosystems. Here, we investigated the sex-specific diet of harbour seals during summer in the Bay of Somme, the largest colony in the English Channel. We collected 91 faecal samples from haul-out sites mainly used by harbour seal but also by few grey seals. Molecular methods have been used to discard grey seal samples and differentiate gender. Collectively, the 86 faecal samples of harbour seals contained the remains of 3327 prey belonging to at least 13 fish species, and represented ~109 kg of consumed fish (of which 85% were soles and plaices). Most of the fish consumed were juvenile and small flatfish (Buglossidium luteum, Microchirus variegatus, Solea vulgaris, Pegusa lascaris, Pleuronectes platessa and Platichthys flesus). Hard-part identification further showed a similar diet between the sexes in terms of primary prey consumed, but a greater diversity of preys in the male diet. The dependence of harbour seals on flatfish has not been reported elsewhere and has significant implications for the sustainability of the important flatfish nursery in the Bay of Somme. Consumption estimation and ecosystem modelling are now required to provide robust assessment of the effect of harbour seal predation on population dynamics of the flatfish nursery, on ecosystem of the Bay of Biscay at- large, and finally on interactions with fisheries.
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Diet of Steller sea lions (Eumetopias jubatus) in Frederick Sound, southeast Alaska: a comparison of quantification methods using scats to describe temporal and spatial variability.
Tollit, D. J., M. A. Wong and A. W. Trites. 2015.
Canadian Journal of Zoology 93:361-376.
abstract
We compared eight dietary indices used to describe the diet of Steller sea lions (Eumetopias jubatus (Schreber, 1776)) from 2001-2004 in Frederick Sound, Southeast Alaska. Remains (n=9 666 items) from 59+ species categories were identified from 1 693 fecal samples (scats) from 14 collection periods. The most frequently occurring prey were walleye pollock (Theragra chalcogramma (Pallas, 1814), 95%), Pacific herring (Clupea harengus (Cuvier and Valenciennes, 1847), 30%), Pacific hake (Merluccius productus (Ayres, 1855), 29%), and arrowtooth flounder (Atheresthes stomias (Jordan and Gilbert 1880), 21%). These species, along with salmon (Oncorhynchus spp.) and skate (Raja spp.), accounted for 80-90% of the reconstructed biomass and energy contribution, with pollock contributing 37-60%. Overall, 80% of fish were 14-42cm long and mainly pelagic, though 40% of scats contained benthic-associated prey. Steller sea lions switched from adult pollock to strong cohorts of juvenile pollock, and took advantage of spawning concentrations of salmon in autumn and herring in late-spring and summer, as well as a climate-driven increase in hake availability. Observed temporal and site differences in diet confirm the need for robust long-term scat sampling protocols. All major indices similarly tracked key temporal changes, despite differences in occurrence and biomass-energy based diet estimates linked to prey size and energy density effects and the application of correction factors.

keywords     Diet, scat, biomass reconstruction, hard remains, otoliths, Steller sea lion, dietary index
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Validating the relationship between 3-dimensional body acceleration and oxygen consumption in trained Steller sea lions.
Volpov, B.L., D.A.S. Rosen, A.W. Trites and J.P.Y. Arnould. 2015.
Journal of Comparative Physiology B 185:695-708.
abstract
We tested the ability of overall dynamic body acceleration (ODBA) to predict the rate of oxygen consumption (sVO2) in freely diving Steller sea lions ( Eumetopias jubatus/) while resting at the surface and diving. The trained sea lions executed three dive types―single dives, bouts of multiple long dives with 4-6 dives per bout, or bouts of multiple short dives with 10-12 dives per bout葉o depths of 40 m, resulting in a range of activity and oxygen consumption levels. Average metabolic rate (AMR) over the dive cycle or dive bout calculated was calculated from sVO2. We found that ODBA could statistically predict AMR when data from all dive types were combined, but that dive type was a significant model factor. However, there were no significant linear relationships between AMR and ODBA when data for each dive type was analyzed separately. The potential relationships between AMR and ODBA were not improved by including dive duration, food consumed, proportion of dive cycle spent submerged or number of dives per bout. It is not clear whether the lack of predictive power within dive type was due to low statistical power, or whether it reflected a true absence of a relationship between ODBA and AMR. The average percent error for predicting AMR from ODBA was 7-11%, and standard error of the estimated AMR was 5-32%. Overall, the extensive range of dive behaviours and physiological conditions we tested indicated that ODBA was not suitable for estimating AMR in the field due to considerable error and the inconclusive effects of dive type.

keywords     Steller sea lion, oxygen consumption, overall dynamic body acceleration, activity, oxygen depletion, diving physiology
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2014
 
Energetic linkages between short-term and long-term effects of whale watching disturbance on cetaceans: an example drawn from northeast Pacific resident killer whales.
Bain, D.E., R. Williams, and A.W. Trites. 2014.
In L. Bejder and R. Williams J. E. S. Higham (eds), Whale-watching, sustainable tourism and ecological management. Cambridge University Press, United Kingdom. pp. 206-228.
abstract
The core objective of efforts to understand and mitigate the effects of whale-watching has been to ensure the survival of populations. The first rigorous studies in the 1980s simply demonstrated that short-term behavioural responses existed. Managers, both in the private sector (whale-watch operators) and public sector responded with simple guidelines. Later studies showed some practices elicited stronger responses than others, and managers again responded with more effective guidelines to preclude activities that elicited strong evasive responses from killer whales. Recent work has shown that these guidelines are insufficient to prevent effects likely to be directly related to fitness (e.g. a reduction in foraging activity and increases in energy expenditure). As managers contemplate how to respond to such results, models such as ours can be constructed to address how short-term effects might relate to population dynamics, and whether data support a correlation between the quantity of exposure and shifts in population growth and decline. As better parameter estimates become available to inform these simple bioenergetics and population dynamics models, they should provide sufficient accuracy and precision to determine whether the effects of vessel traffic are sufficient to reduce the probability that the populations will survive in the long term (i.e. do they exceed potential biological removal (PBR)), or do the cumulative effects of whale watching and other human activities put the population in jeopardy of imminent extinction? The resident killer whales of the northeast Pacific represent an exceedingly data-rich case study of behavior and population biology, but they also represent an interesting study in management. The degree to which management is or is not precautionary determines how much evidence of population-level effects is needed before management actions are imposed. And as some of the science that has been done on this population is applied to other cetaceans, it is important to spell out another lesson learned— namely, that it is essential to specify quantitative management objectives that identify how much of an effect managers are willing to tolerate (limits of acceptable change, PBR and uncertainty:. Otherwise, the science can and will continue without serving any practical purpose as long as the whales persist.
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Broad thermal capacity facilitates the primarily pelagic existence of northern fur seals (Callorhinus ursinus).
Dalton, A.J.M., D.A.S. Rosen and A.W. Trites. 2014.
Marine Mammal Science 30:994-1013.
abstract
Thermoregulatory capacity may constrain the distribution of marine mammals despite having anatomical and physiological adaptations to compensate for the thermal challenges of an aquatic lifestyle. We tested whether subadult female northern fur seals (Callorhinus ursinus) experience increased thermoregulatory costs in water temperatures potentially encountered during their annual migration in the Bering Sea and North Pacific Ocean. Metabolic rates were measured seasonally in 6 captive female northern fur seals (2.75 to 3.5 yr old) in ambient air and controlled water temperatures of 2, 10, and 18 °C. Rates of oxygen consumption in ambient air (1 – 18 °C) were not related to environmental temperature except below 2.5 °C (winter only). However, metabolism was significantly higher during the fall seasonal trials (Sept – Oct) compared to other times of year, perhaps due to the costs of molting. The fur seals appeared thermally neutral in all seasons for all water temperat ures tested (2 – 18 °C) except during the summer when metabolic rates were higher in the 2 °C water. Comparing this broad thermal neutral zone to the average sea surface temperatures potentially encountered during annual migrations indicates wild fur seals can likely exploit a large geographic area without added thermal metabolic costs.
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Season and time of day affect the ability of accelerometry and the doubly labeled water methods to measure energy expenditure in northern fur seals (Callorhinus ursinus).
Dalton, A.J.M., D.A.S. Rosen and A.W. Trites. 2014.
Journal of Experimental Marine Biology and Ecology 452:125-136.
abstract
Estimates of energy expenditure for free-ranging animals are essential to answering a range of fundamental questions in animal biology, but are challenging to obtain and difficult to validate. We simultaneously employed three methods to measure the energy expenditure of 6 captive female northern fur seals (Callorhinus ursinus) during 5-day trials across 4 seasons: respirometry (oxygen consumption), doubly labeled water (DLW), and accelerometry. The DLW method estimated that the fur seals expended 13.1 ? 16.5% more energy than indicated by the more direct measures of oxygen consumption. Accelerometry failed to predict the average mass specific rate of oxygen consumption (VË™ O2DEE) within the individual seasons over entire 5- day trials. However, on a finer time scale (15 or 60 min) and adjusted for time of day, accelerometry estimated energy expenditure within an average difference of 5.4 ? 29.3% (60 min intervals) and 13.8 ? 39.5% (15 min intervals) of respirometry measured values. Our findings suggest that accelerometers have the potential to be more effective than the DLW method for measuring energy expenditure of free-ranging animals. However, rates of oxygen consumption varied with season, independent of overall activity. Seasonal effects (and time of day for accelerometry) must therefore be accounted for when estimating energy expenditure from measures of DLW and acceleration of free-swimming northern fur seals. Such corrections required for estimating energy expenditures in northern fur seals have implications for using accelerometers and DLW to estimate the energy expenditure of other species.

keywords     accelerometry, Callorhinus ursinus, daily energy expenditure, doubly labeled water, northern fur seal, respirometry
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Inflation and deflation pressure-volume loops in anesthetized pinnipeds confirms compliant chest and lungs.
Fahlman, A., S.H. Loring, S.P. Johnson, M. Haulena, A.W. Trites, V.A. Fravel and W.G. Van Bonn. 2014.
Frontiers in Physiology Vol 5(433)
abstract
We examined structural properties of the marine mammal respiratory system, and tested Scholander's hypothesis that the chest is highly compliant by measuring the mechanical properties of the respiratory system in five species of pinniped under anesthesia (Pacific harbor seal, Phoca vitulina; northern elephant seal, Mirounga angustirostris; northern fur seal Callorhinus ursinus; California sea lion, Zalophus californianus; and Steller sea lion, Eumetopias jubatus). We found that the chest wall compliance (CCW) of all five species was greater than lung compliance (airways and alveoli, CL) as predicted by Scholander, which suggests that the chest provides little protection against alveolar collapse or lung squeeze. We also found that specific respiratory compliance was significantly greater in wild animals than in animals raised in an aquatic facility. While differences in ages between the two groups may affect this incidental finding, it is also possible that lung conditioning in free-living animals may increase pulmonary compliance and reduce the risk of lung squeeze during diving. Overall, our data indicate that compliance of excised pinniped lungs provide a good estimate of total respiratory compliance.
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Sensitivity to hypercapnia and elimination of CO2 following diving in Steller sea lions (Eumetopias jubatus).
Gerlinsky, C.D., D.A.S. Rosen and A.W. Trites. 2014.
Journal of Comparative Physiology B. 184:535-544.
abstract
Marine mammal foraging behaviour inherently depends on diving ability. Declining populations of Steller sea lions may be facing nutritional stress that could affect their diving ability through changes in body composition or metabolism. Our objective was to determine whether nutritional stress (restricted food intake resulting in a 10% decrease in body mass) altered the calculated aerobic dive limit (cADL) of four captive sea lions diving in the open ocean, and how this related to changes in observed dive behaviour. We measured diving metabolic rate (DMR), blood O2 stores, body composition and dive behaviour prior to and while under nutritional restriction. We found that nutritionally stressed sea lions increased the duration of their single long dives, and the proportion of time they spent at the surface during a cycle of four dives. Nutritionally stressed sea lions lost both lipid and lean mass, resulting in potentially lower muscle O2 stores. However, total body O2 stores increased due to rises in blood O2 stores associated with having higher blood volumes. Nutritionally stressed sea lions also had higher mass-specific metabolic rates. The greater rise in O2 stores relative to the increase in mass-specific DMR resulted in the sea lions having a longer cADL when nutritionally stressed. We conclude that there was no negative effect of nutritional stress on the diving ability of sea lions. However, nutritional stress did lower foraging efficiency and require more foraging time to meet energy requirements due to increases in diving metabolic rates and surface recovery times.
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Steller sea lions (Eumetopias jubatus) have greater blood volumes, higher diving metabolic rates and a longer aerobic dive limit when nutritionally stressed.
Gerlinsky, C.D., A.W. Trites and D.A.S. Rosen. 2014.
Journal of Experimental Biology 217:769-778.
abstract
Marine mammal foraging behavior inherently depends on diving ability. Declining populations of Steller sea lions may be facing nutritional stress that could affect their diving ability through changes in body composition or metabolism. Our objective was to determine whether nutritional stress (restricted food intake resulting in a 10% decrease in body mass) altered the calculated aerobic dive limit (cADL) of four captive sea lions diving in the open ocean, and how this related to changes in observed dive behaviour. We measured diving metabolic rate (DMR), blood O2 stores, body composition and dive behaviour prior to and while under nutritional restriction. We found that nutritionally stressed sea lions increased the duration of their single long dives, and the proportion of time they spent at the surface during a cycle of four dives. Nutritionally stressed sea lions lost both lipid and lean mass, resulting in potentially lower muscle O2 stores. However, total body O2 stores increased due to rises in blood O2 stores associated with having higher blood volumes. Nutritionally stressed sea lions also had higher mass-specific metabolic rates. The greater rise in O2 stores relative to the increase in mass-specific DMR resulted in the sea lions having a longer cADL when nutritionally stressed. We conclude that there was no negative effect of nutritional stress on the diving ability of sea lions. However, nutritional stress did lower foraging efficiency and require more foraging time to meet energy requirements due to increases in diving metabolic rates and surface recovery times.

keywords     Steller sea lion, blood volume, nutritional stress, diving metabolism, oxygen stores, dive behavior
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Bayesian melding of the dead-reckoned path and GPS measurements for an accurate and high-resolution path of marine mammals.
Liu, Y., B. C. Battaile, J. V. Zidek and A. Trites. 2014.
arXiv Vol 14116683v2
abstract
With the recent advances in electrical engineering, devices attached to free-ranging marine mammals today can collect oceanographic data in remarkable high spatial-temporal resolution. However, those data cannot be fully utilized without a matching high-resolution and accurate path of the animal, which is currently missing in this field. In this paper, we develop a Bayesian melding approach based on a Brownian Bridge process to combine the fine-resolution but seriously biased Dead-Reckoned path and the precise but sparse GPS measurements, which results in an accurate and high-resolution estimated path together with credible bands as quantified uncertainty statements. We also exploit the properties of underlying processes and some approximations to the likelihood to dramatically reduce the computational burden of handling those big high resolution data sets.

keywords     Dead reckoning, swimming path, northern fur seal, Bayesian melding, Brownian Bridge
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Bayesian melding of the dead-reckoned path and GPS measurements for an accurate and high-resolution path of marine mammals.
Liu, Y., B.C. Battaile, J. V. Zidek and A.W. Trites. 2014.
arXiv Vol 14116683v2
abstract
With the recent advances in electrical engineering, devices attached to free-ranging marine mammals today can collect oceanographic data in remarkable high spatial-temporal resolution. However, those data cannot be fully utilized without a matching high-resolution and accurate path of the animal, which is currently missing in this field. In this paper, we develop a Bayesian melding approach based on a Brownian Bridge process to combine the fine-resolution but seriously biased Dead-Reckoned path and the precise but sparse GPS measurements, which results in an accurate and high-resolution estimated path together with credible bands as quantified uncertainty statements. We also exploit the properties of underlying processes and some approximations to the likelihood to dramatically reduce the computational burden of handling those big high resolution data sets.

keywords     Dead reckoning, swimming path, northern fur seal, Bayesian melding, Brownian Bridge
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The decline of Steller sea lions (Eumetopias jubatus) in the North Pacific: insights from indigenous people, ethnohistoric records and archaeological data.
Maschner, H. D. G., A. W. Trites, K. L. Reedy-Maschner and M. Betts. 2014.
Fish and Fisheries 15:634-660.
abstract
A number of hypotheses have been proposed to explain the most recent decline (1977-2012) of Steller sea lions (Eumetopias jubatus) in the Gulf of Alaska and Aleutian Islands. We examined hypotheses about fisheries competition, environmental change, predation, anthropogenic effects, and disease using observations of modern Aleut and archaeological, ethnohistoric, and ethnographic data from the western Gulf of Alaska and Aleutian Islands. These data indicate that Steller sea lion numbers have declined and recovered repeatedly over the past 4,500 years and were last at critically low numbers during the 1870s-1930s. Steller sea lions appear to have been more abundant during the cool periods—and lower during the warmer periods. Observations by local peoples, explorers, early government surveyors, and biologists since the late 1800s suggest that low populations of Steller sea lions have been associated with high populations of Gadidae fishes (Pacific cod – Gadus macrocephalus and walleye pollock – Theragra chalcogramma), and are consistent with the ocean climate hypothesis to explain the decline of sea lions. They suggest that removals by people and killer whales (Orcinus orca) did not cause the sea lion declines, but could have compounded the magnitude of the decline as sea lion numbers approached low densities. Archaeological, anthropological and ethnohistorical analyses demonstrate that fluctuations have occurred in the North Pacific over hundreds to thousands of years, and provide context for understanding the changes that occur today and the changes that will continue to occur in the future.
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Short-term episodes of imposed fasting have a greater effect on young northern fur seals (Callorhinus ursinus) in summer than in winter.
Rosen, D. A. S., B. L. Volpov and A. W. Trites. 2014.
Conservation Physiology 2:1-9.
abstract
Unexpected shortages of food may affect wildlife differently depending on the time of year it occurs. We imposed 48-hr fasts on six female northern fur seals (Callorhinus ursinus; ages 6 ? 24 months) to identify times of year when they might be particularly sensitive to interruptions in food supply. We monitored changes in their resting metabolic rates and their metabolic response to thermal challenges, and also examined potential bioenergetic causes for seasonal differences in body mass loss. Pre-fast metabolism of the fur seals while in ambient air or submerged in 4 ?C water was higher during summer (Jun-Sep) than winter (Nov-Mar), and submergence did not significantly increase metabolism indicating a lack of additional thermoregulatory costs. There was no evidence of metabolic depression following the fasting periods, nor did metabolism increase during the post-fast thermal challenge, suggesting that mass loss did not negatively impact thermoregulatory capacity. However, the fur seals lost mass at greater rates while fasting during the summer months when metabolism is normally high to facilitate faster growth rates (which would ordinarily have been supported by higher food intake levels). Our findings suggest that summer is a more critical time of year than winter for young northern fur seals to obtain adequate nutrition.
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Thermal limits in young northern fur seals, Callorhinus ursinus.
Rosen, D.A.S. and A.W. Trites. 2014.
Marine Mammal Science 30(3):1014-1028.
abstract
The thermoregulatory abilities of northern fur seals (Callorhinus ursinus) during their first two years in the frigid waters of the North Pacific Ocean may limit their geographic distribution and alter the costs for exploiting different species of prey. We determined the thermoneutral zone of 6 young northern fur seals by measuring their metabolism in ambient air and controlled water temperatures (0-12 °C) from ages 8 to 24 mo. We found that the ambient air temperatures within our study (overall 1.5-23.9 °C) did not affect resting metabolic rates. Calculated lower critical temperatures in water varied between 3.9 and 8.0 °C, while an upper critical temperature in water was only discernible during a single set of trials. These thermal responses provide insight into the possible physiological constraints on foraging ecology in young northern fur seals, as well as the potential energetic consequences of ocean climate change and altered prey distributions.

keywords     Northern fur seal, Callorhinus ursinus, thermoregulation, metabolism, bioenergetics
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Drag, but not buoyancy, affects swim speed in captive Steller sea lions.
Suzuki, I., K. Sato, A. Fahlman, Y. Naito, N. Miyazaki and A. W. Trites. 2014.
Biology Open 3:379-386.
abstract
Swimming at an optimal speed is critical for breath-hold divers seeking to maximize the time they can spend foraging underwater. Theoretical studies have predicted that the optimal swim speed for an animal while transiting to and from depth is independent of buoyancy, but is dependent on drag and metabolic rate. However, this prediction has never been experimentally tested. Our study assessed the effects of buoyancy and drag on the swim speed of three captive Steller sea lions (Eumetopias jubatus) that made 186 dives. Our study animals were trained to dive to feed at fixed depths (10–50 m) under artificially controlled buoyancy and drag conditions. Buoyancy and drag were manipulated using a pair of polyvinyl chloride (PVC) tubes attached to harnesses worn by the sea lions, and buoyancy conditions were designed to fall within the natural range of wild animals (,12–26% subcutaneous fat). Drag conditions were changed with and without the PVC tubes, and swim speeds were recorded and compared during descent and ascent phases using an accelerometer attached to the harnesses. Generalized linear mixed-effect models with the animal as the random variable and five explanatory variables (body mass, buoyancy, dive depth, dive phase, and drag) showed that swim speed was best predicted by two variables, drag and dive phase (AIC=-139). Consistent with a previous theoretical prediction, the results of our study suggest that the optimal swim speed of Steller sea lions is a function of drag, and is independent of dive depth and buoyancy.
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Improving accuracy of DNA diet estimates using food tissue control materials and an evaluation of proxies for digestion bias.
Thomas, A.C., S.N. Jarman, K.H. Haman, A.W. Trites and B.E. Deagle. 2014.
Molecular Ecology 23:3706-3718.
abstract
Ecologists are increasingly interested in quantifying consumer diets based on food DNA in dietary samples and high-throughput sequencing of marker genes. It is tempting to assume that food DNA sequence proportions recovered from diet samples are representative of consumer's diet proportions, despite the fact that captive feeding studies do not support that assumption. Here, we examine the idea of sequencing control materials of known composition along with dietary samples in order to correct for technical biases introduced during amplicon sequencing, and biological biases such as variable gene copy number. Using the Ion Torrent PGM©, we sequenced prey DNA amplified from scats of captive harbour seals (Phoca vitulina) fed a constant diet including three fish species in known proportions. Alongside, we sequenced a prey tissue mix matching the seals’ diet to generate Tissue Correction Factors (TCFs). TCFs improved the diet estimates (based on sequence proportions) for all species and reduced the average estimate error from 28 ± 15% (uncorrected), to 14 ± 9% (TCF corrected). The experimental design also allowed us to infer the magnitude of prey-specific digestion biases and calculate Digestion Correction Factors (DCFs). The DCFs were compared to possible proxies for differential digestion (e.g., fish% protein,% lipid,% moisture) revealing a strong relationship between the DCFs and percent lipid of the fish prey, suggesting prey-specific corrections based on lipid content would produce accurate diet estimates in this study system. These findings demonstrate the value of parallel sequencing of food tissue mixtures in diet studies and offer new directions for future research in quantitative DNA diet analysis.

keywords     next-generation sequencing; diet analysis; pinniped; correction factors
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The marine mammals.
Trites, A. W. 2014.
In R. J. Beamish and G. A. McFarlane (eds), The sea among us: the amazing Strait of Georgia. Harbour Publishing Co, Madeira Park, BC. pp. 183-210.
abstract
Many eyes and ears keep watch over marine mammals in the Strait of Georgia. They range from the dedicated individuals who mobilize to help a stranded cetacean or care for a sick seal or porpoise, to the mariners and whale watchers who are often the first to notice unusual events or the changes in numbers and distribution. For them and many others, marine mammals are fascinating creatures and important indicators of the health of the Strait of Georgia. The eleven species of seals, sea lions, porpoises, dolphins and baleen whales that inhabit the Strait of Georgia constitute an incredible diversity of abundant marine life to be living on the doorstep of one of the largest concentrations of people in North America. It represents one of the most accessible assemblages of marine mammals in the world for people to see and observe, and is a testament to the richness and bio-diversity of the Strait of Georgia that often goes unseen and unrecognized by many who walk its shores.
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2013
 
Linking survival and reproductive can improve model estimates of vital rates derived from limited time-series counts of pinnipeds and other species.
Battaile, B.C. and A.W. Trites. 2013.
PLoS ONE. Vol 8(11):e77389
abstract
We propose a method to model the physiological link between somatic survival and reproductive output that reduces the number of parameters that need to be estimated by models designed to determine combinations of birth and death rates that produce historic counts of animal populations. We applied our Reproduction and Somatic Survival Linked (RSSL) method to the population counts of three species of North Pacific pinnipeds (harbor seals, Phoca vitulina richardii (Gray, 1864); northern fur seals, Callorhinus ursinus (L., 1758); and Steller sea lions, Eumetopias jubatus (Schreber, 1776))—and found our model outperformed traditional models when fitting vital rates to common types of limited datasets, such as those from counts of pups and adults. However, our model did not perform as well when these basic counts of animals were augmented with additional observations of ratios of juveniles to total non-pups. In this case, the failure of the ratios to improve model performance may indicate that the relationship between survival and reproduction is redefined or disassociated as populations change over time or that the ratio of juveniles to total non-pups is not a meaningful index of vital rates. Overall, our RSSL models show advantages to linking survival and reproduction within models to estimate the vital rates of pinnipeds and other species that have limited time-series of counts.

keywords     Callorhinus ursinus, Eumetopias jubatus, harbor seal, model parameterization, northern fur seal, Phoca vitulina richardii, pinniped, population dynamics, reproduction, senescence, survival, vital rates
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Prey patch patterns predict habitat use by top marine predators with diverse foraging strategies.
Benoit-Bird, K. J., B. C. Battaile, S. A. Heppell, B. Hoover, D. Irons, N. Jones, K. J. Kuletz, C. A. Nordstrom, R. Paredes, R. M. Suryan, C. M. Waluk and A. W. Trites. 2013.
PLoS ONE Vol 8(1):e53348.
abstract
Spatial coherence between predators and prey has rarely been observed in pelagic marine ecosystems. We used measures of the environment, prey abundance, prey quality, and prey distribution to explain the observed distributions of three cooccurring predator species breeding on islands in the southeastern Bering Sea: black-legged kittiwakes (Rissa tridactyla), thick-billed murres (Uria lomvia), and northern fur seals (Callorhinus ursinus). Predictions of statistical models were tested using movement patterns obtained from satellite-tracked individual animals. With the most commonly used measures to quantify prey distributions - areal biomass, density, and numerical abundance - we were unable to find a spatial relationship between predators and their prey. We instead found that habitat use by all three predators was predicted most strongly by prey patch characteristics such as depth and local density within spatial aggregations. Additional prey patch characteristics and physic al habitat also contributed significantly to characterizing predator patterns. Our results indicate that the smallscale prey patch characteristics are critical to how predators perceive the quality of their food supply and the mechanisms they use to exploit it, regardless of time of day, sampling year, or source colony. The three focal predator species had different constraints and employed different foraging strategies – a shallow diver that makes trips of moderate distance (kittiwakes), a deep diver that makes trip of short distances (murres), and a deep diver that makes extensive trips (fur seals). However, all three were similarly linked by patchiness of prey rather than by the distribution of overall biomass. This supports the hypothesis that patchiness may be critical for understanding predator-prey relationships in pelagic marine systems more generally.
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Foraging behavior of northern fur seals closely matches the hierarchical patch scales of prey.
Benoit-Bird, K. J., B. C. Battaile, C. A. Nordstrom and A. W. Trites. 2013.
Marine Ecology Progress Series 479:283-302.
abstract
Marine prey often occur in hierarchical mosaics whereby small, high-density patches are nested inside of larger, lower density aggregations. We tested the extent to which the foraging behavior of a marine predator (northern fur seal Callorhinus ursinus) could be explained by the hierarchical patch structure of a dominant prey species (juvenile walleye pollock Theragra chalcogramma) in the eastern Bering Sea. Comparing the movements of satellite-tracked fur seals with ship-based acoustic surveys of prey revealed that fur seals did not randomly search for prey, but instead showed deviations in the distribution of step-lengths (distances between their foraging patches) corresponding to the distances between aggregations of prey. Scales of prey distribution varied between Bering Sea shelf and deep-water slope habitats, while spatial scale distributions of fur seals showed corresponding changes, indicating that their search strategies were not innate patterns decoupled from the environment. Fur seals tended to avoid the smallest prey patches in both shelf and slope habitats. They also avoided prey patches that were separated by large distances. Fur seals responded to several levels of prey patchiness simultaneously, resulting in strong correlations between predator and prey over the entire range of aggregation scales observed in juvenile pollock. Our results indicate that, despite having a varied diet, fur seal foraging paths were defined by juvenile pollock aggregations. The presence of hierarchical, scale-dependent aggregation in both predator and prey provides new insights into fur seal behavior and a means to predict the dynamics of their interactions with prey.

keywords     Patchiness, Spatial scale, Predator–prey, Foraging behavior, Hierarchical, Northern fur seal, Juvenile walleye pollock
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Faecal DNA amplification in Pacific walruses (Odobenus rosmarus divergens).
Bowles, E. and A.W. Trites. 2013.
Polar Biology. 36:755-759.
abstract
Dietary information is critical for assessing the population status of seals, sea lions and walruses—and is determined for most species of pinnipeds using non-invasive methods. However, diets of walruses continue to be described from the stomach contents of dead individuals. Our goal was to assess whether DNA could be extracted from the faeces of Pacific walruses (O. rosmarus divergens) collected at haulout sites, and whether potential prey species or taxa could be amplified from that DNA. We extracted DNA from 70 faecal samples collected from ice pans in the Bering Sea during the spring of 2008 and 2009 (with between 4.6 and 308.9 ng/µl of DNA in every sample). We also extracted DNA from 12 potential prey species or taxa collected by bottom grabs in 2009 to identify positive controls for primers, and to test the ability of previously published taxon-specific and species-specific primers to correctly identify the prey using conventional PCR. We tested primers that successfu lly amplified DNA from the tissue of at least one potential prey species or taxon on all 70 walrus faecal samples. We found that two sets of primers successfully amplified many of the potential prey species or taxa using DNA from their tissue, and that one of these primer sets produced positive amplification in 4 of the 70 faecal samples. The band size that was produced for prey organisms and in the faecal samples was consistent with expectations, although prey identities were not verified with sequencing. Our pilot study demonstrates that DNA can be successfully extracted and amplified from walrus faeces, providing a stepping stone towards describing the diets of walruses from faecal DNA.
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Quantifying sequence proportions in a DNA-based diet study using Ion Torrent amplicon sequencing: which counts count?
Deagle, B.E., A.C. Thomas, A. K. Shaffer, A.W. Trites, and S.N. Jarman. 2013.
Molecular Ecology Resources
abstract
A goal of many environmental DNA barcoding studies is to infer quantitative information about relative abundances of different taxa based on sequence read proportions generated by high-throughput sequencing. However, potential biases associated with this approach are only beginning to be examined. We sequenced DNA amplified from faeces (scats) of captive harbour seals (Phoca vitulina) to investigate whether sequence counts could be used to quantify the seals’ diet. Seals were fed fish in fixed proportions, a chordate- specific mitochondrial 16S marker was amplified from scat DNA and amplicons sequenced using an Ion Torrent PGM™. For a given set of bioinformatic parameters, there was generally low variability between scat samples in proportions of prey species sequences recovered. However, proportions varied substantially depending on sequencing direction, level of quality filtering (due to differences in sequence quality between species) and minimum read length considered. Short primer tags used to identify individual samples also influenced species proportions. In addition, there were complex interactions between factors; for example, the effect of quality filtering was influenced by the primer tag and sequencing direction. Resequencing of a subset of samples revealed some, but not all, biases were consistent between runs. Less stringent data filtering (based on quality scores or read length) generally produced more consistent proportional data, but overall proportions of sequences were very different than dietary mass proportions, indicating additional technical or biological biases are present. Our findings highlight that quantitative interpretations of sequence proportions generated via high- throughput sequencing will require careful experimental design and thoughtful data analysis.

keywords     DNA barcoding, Ion Torrent, metabarcoding, next-generation sequencing, pinniped diet
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Activity as a proxy to estimate metabolic rate and to partition the metabolic cost of diving vs. breathing in pre- and post-fasted Steller sea lions.
Fahlman, A., C. Svärd, D. A. S. Rosen, R. Wilson and A. W. Trites. 2013.
Aquatic Biology 18:175-184.
abstract
Three Steller sea lions (Eumetopias jubatus), trained to dive voluntarily to depths ranging from 10 to 50 m, were used to determine whether the relationship between activity and metabolic rate during a diving interval (MRDI, dive + surface interval) was affected by fasting (9-days) during the breeding season (spring through summer). We subsequently used the relationship between activity and MRDI to partition the metabolic costs between underwater breath-holding activity and surface breathing activities. We estimated activity from Overall Dynamic Body Acceleration (ODBA) measured using a 3-axis accelerometer, and measured MRDI using flow-through respirometry. The relationship between ODBA-based activity and MRDI was not affected by fasting period, suggesting ODBA can be used to predict energy expenditure regardless of nutritional state in the spring and summer. However, the relationship between ODBA and dive metabolic rate differs from the relationship between ODBA and the s urface metabolic rate before diving (MRSp). Partitioning MRDI into the metabolic cost of remaining at the surface (MRs) versus swimming underwater (MRUS) suggests that the metabolic cost of diving for Steller sea lions is approximately 29% lower than when breathing at the surface. ODBA appears to be a reasonable proxy to estimate metabolic rate in marine mammals, but more detailed behavioral data may be required to accurately apply the method in the field.
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Energetic requirements of North Atlantic right whales and the implications for species recovery.
Fortune, S.M.E., A.W. Trites, C.A. Mayo, D.A.S. Rosen and P.K. Hamilton. 2013.
Marine Ecology Progress Series. 478:253-272.
abstract
Management plans for North Atlantic right whales Eubalaena glacialis focus on preventing mortality from ship strikes and fishing gear entanglement. However, recovery may also be limited because individuals are under nutritional stress. We quantified the food requirements of North Atlantic right whales by age, sex and reproductive state and compared their predicted needs with field estimates of prey consumption to assess whether any demographic group of right whales might be nutritionally stressed. Energy requirements were estimated using a bioenergetics model that accounted for uncertainty in energy inputs and outputs. Consumption was estimated with prey samples taken near feeding whales in Cape Cod Bay (n = 28 net collections) and the Bay of Fundy (n = 19 optical plankton recordings). We found that calves required the least energy (~1767 MJ d-1) and that lactating females required the most (~4120 MJ d-1). Juveniles required considerably more energy than adult males and non-reproductive females. Our estimates of energy requirements for juveniles (~1906 MJ d-1), adult males (~1793 MJ d-1), and non-reproductive females (~2104 MJ d-1) compared favorably with estimates of actual consumption in Cape Cod Bay and the Bay of Fundy (i.e. they differed by ≤15%), suggesting that our model was reliable. However, lactating females appear to have obtained considerably less than their predicted energy requirements in both habitats. These findings suggest that lactating females may be experiencing an energy deficit, which may affect reproductive rates and slow population recovery. Nutritional stress may thus be limiting the recovery of North Atlantic right whales.

keywords     Bioenergetic model, Eubalaena glacialis, nutritional stress, energetic consumption, energetic requirements
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High diving metabolism results in a short aerobic dive limit for Steller sea lions (Eumetopias jubatus).
Gerlinsky, C. D., D. A. S. Rosen and A. W. Trites. 2013.
Journal of Comparative Physiology. B, Biochemical, Systemic, and Environmental Physiology. 186:699-708.
abstract
The diving capacity of marine mammals is typically defined by the aerobic dive limit (ADL) which, in lieu of direct measurements, can be calculated (cADL) from total body oxygen stores (TBO) and diving metabolic rate (DMR). To estimate cADL, we measured blood oxygen stores, and combined this with diving oxygen consumption rates (VO(2) recorded from 4 trained Steller sea lions diving in the open ocean to depths of 10 or 40 m. We also examined the effect of diving exercise on O(2) stores by comparing blood O(2) stores of our diving animals to non-diving individuals at an aquarium. Mass-specific blood volume of the non-diving individuals was higher in the winter than in summer, but there was no overall difference in blood O(2) stores between the diving and non-diving groups. Estimated TBO (35.9 ml O(2) kg(-1) )was slightly lower than previously reported for Steller sea lions and other Otariids. Calculated ADL was 3.0 min (based on an average DMR of 2.24 L O(2) min(-1)) and was signific antly shorter than the average 4.4 min dives our study animals performed when making single long dives-but was similar to the times recorded during diving bouts (a series of 4 dives followed by a recovery period on the surface), as well as the dive times of wild animals. Our study is the first to estimate cADL based on direct measures of VO(2) and blood oxygen stores for an Otariid and indicates they have a much shorter ADL than previously thought.
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Inter-population movements of Steller sea lions in Alaska with implications for population separation.
Jemison, L.A., G.W. Pendleton, L.W. Fritz, K.K. Hastings, J.M. Maniscalco, A.W Trites and T.S. Gelatt. 2013.
PLoS ONE. Vol 8(8):e70167.
abstract
Genetic studies and differing population trends support the separation of Steller sea lions (Eumetopias jubatus) into a western distinct population segment (WDPS) and an eastern DPS (EDPS) with the dividing line between populations at 144° W. Despite little exchange for thousands of years, the gap between the breeding ranges narrowed during the past 15–30 years with the formation of new rookeries near the DPS boundary. We analyzed >22,000 sightings of 4,172 sea lions branded as pups in each DPS from 2000–2010 to estimate probabilities of a sea lion born in one DPS being seen within the range of the other DPS (either ‘West’ or ‘East’). Males from both populations regularly traveled across the DPS boundary; probabilities were highest at ages 2–5 and for males born in Prince William Sound and southern Southeast Alaska. The probability of WDPS females being in the East at age 5 was 0.067 but 0 for EDPS females which rarely traveled to the West. Prince William Sound-born females had high probabilities of being in the East during breeding and non-breeding seasons. We present strong evidence that WDPS females have permanently emigrated to the East, reproducing at two ‘mixing zone’ rookeries. We documented breeding bulls that traveled 6,500 km round trip from their natal rookery in southern Alaska to the northern Bering Sea and central Aleutian Islands and back within one year. WDPS animals began moving East in the 1990s, following steep population declines in the central Gulf of Alaska. Results of our study, and others documenting high survival and rapid population growth in northern Southeast Alaska suggest that conditions in this mixing zone region have been optimal for sea lions. It is unclear whether eastward movement across the DPS boundary is due to less-optimal conditions in the West or a reflection of favorable conditions in the East.

keywords     branding, resights, distribution, migration, movements, colonization
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Foraging habitats of lactating northern fur seals are structured by thermocline depths and submesoscale fronts in the eastern Bering Sea.
Nordstrom, C. A., B.C. Battaile, C. Cotté and A. W. Trites. 2013.
In Deep-Sea Research II: Topical Studies in Oceanography.  88-89:78-96.
abstract
The relationships between fine-scale oceanographic features, prey aggregations, and the foraging behavior of top predators are poorly understood. We investigated whether foraging patterns of lactating northern fur seals (Callorhinus ursinus) from two breeding colonies located in different oceanographic domains of the eastern Bering Sea (St. Paul Island shelf; Bogoslof Island˜oceanic) were a function of submesoscale oceanographic features. We tested this by tracking 87 lactating fur seals instrumented with bio-logging tags (44 St. Paul Island, 43 Bogoslof Island) during JulyˆSeptember, 2009. We identified probable foraging hotspots using first-passage time analysis and statistically linked individual areas of high-use to fine-scale oceanographic features using mixed-effects Cox-proportional hazard models. We found no overlap in foraging areas used by fur seals from the two islands, but a difference in the duration of their foraging trips˜trips from St. Paul Island were twice as long (7.9 d average) and covered 3-times the distance (600 km average) compared to trips from Bogoslof Island. St. Paul fur seals also foraged at twice the scale (mean radius = 12 km) of Bogoslof fur seals (6 km), which suggests that prey were more diffuse near St. Paul Island than prey near Bogoslof Island. Comparing first passage times with oceanographic covariates revealed that foraging hotspots were linked to thermocline depth and occurred near submesoscale surface fronts (eddies and filaments). St. Paul fur seals that mixed epipelagic (night) and benthic (day) dives primarily foraged on-shelf in areas with deeper thermoclines that may have concentrated prey closer to the ocean floor, while strictly epipelagic (night) foragers tended to use waters with shallower thermoclines that may have aggregated prey closer to the surface. Fur seals from Bogoslof Island foraged almost exclusively over the Bering Sea basin and appeared to hunt intensively along submesoscale fronts that may have converged prey within narrow bands near the surface. Bogoslof fur seals also foraged closer to their island which was surrounded by strong surface fronts, while fur seals from St. Paul Island traveled4100 km and extended some trips off-shelf to the basin to forage at similar oceanographic features. The relative distribution and accessibility of prey-concentrating oceano- graphic features can account for the observed inter-island foraging patterns, which may in turn have population level consequences for the two fur seal colonies.

keywords     Habitat selection, First-passage time, Submesoscale features, Finite-size Lyapunov exponent,Cox proportional hazard model, Alaska, Eastern Bering Sea
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Northern fur seals augment ship-derived ocean temperatures with higher temporal and spatial resolution data in the eastern Bering Sea.
Nordstrom, C.A., K. J. Benoit-Bird, B.C. Battaile and A.W. Trites. 2013.
Deep Sea Research II 94:257-273.
abstract
Oceanographic data collected by marine vertebrates are increasingly being used in biological and physical studies under the assumption that data recorded by free-ranging animals are comparable to those from traditional vertical sampling. We tested this premise by comparing the water temperatures measured during a 2009 oceanographic cruise with those measured during 82 foraging trips by instrumented northern fur seals (Callorhinus ursinus) in the eastern Bering Sea. The animal-borne data loggers were equipped with a fast-response temperature sensor and recorded 6,492 vertical profiles to depths ≥ 50 m during long distance (up to 600 km) foraging trips. Concurrent sampling during the oceanographic cruise collected 247 CTD casts in the same 5-week period. Average temperature differences between ship casts and seal dives (0.60 ± 0.61 °C), when the two were within 1 day and 10 km of each other (n = 32 stations), were comparable to mean differences between adjacent 10 km ship casts (0.46 ± 0.44 °C). Isosurfaces were evaluated at region wide scales at depths of 1 m and 50 m while the entire upper 100 m of the water column was analyzed at finer-scales in highly sampled areas. Similar trends were noted in the temperature fields produced by ships or seals despite the differences in sampling frequency and distribution. However, the fur seal dataset was of higher temporal and spatial resolution and was thereby able to visualize finer-detail with less error than ship-derived data, particularly in dynamic areas. Integrating the ship and seal datasets provided temperature maps with an unprecedented combination of resolution and coverage allowing fine-scale processes on-shelf and over the basin to be described simultaneously. Fur seals (n = 65 trips) also collected 4,700 additional profiles post ship cruise which allowed ≥1 °C warming of the upper 100 m to be documented through mid-September, including regions where ship sampling has traditionally been sparse. Our data show that hydrographic information collected by wide-ranging, diving animals such as fur seals can contribute physical data comparable to, or exceeding those, of traditional sampling methods at regional or finer scales when the questions of interest coincide with the ecology of the species.
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Seasonal changes in the food intake of captive Pacific white-sided dolphins (Lagenorhynchus obliquidens).
Piercey, R.S., E.U. Rechsteiner, B.C. Battaile and A.W. Trites. 2013.
Aquatic Mammals. 39:211-220.
abstract
The Pacific white-sided dolphin (Lagenorhynchus obliquidens) is one of the most abundant apex predators in the North Pacific Ocean, but little is known about how much food they consume and whether their food requirements vary seasonally. We attempted to address these two issues using the feeding records of five Pacific white-sided dolphins housed at the Vancouver Aquarium. These individuals consumed an average of 7.9 kg ± 0.35 (± SE) of fish and squid per day (~11,000 kcal day-1), which equated to ~7% of their body mass and an annual mean intake of 2,880 kg ± 131.8 (± SE) per dolphin (N = 5). Patterns of food consumption and seasonal changes were assessed using long-term feeding records (1977 to 2001) from a single adult female, and were found to be highest in terms of biomass and calories in late December, and about 15% less in late May and early June. Seasonal pool temperatures (range 6.5 to 21.5 C) were inversely related to food intake and accounted for part of the variation, suggesting that seasonal cues other than temperature triggered the changes in food consumption. Amounts of prey consumed by Pacific white-sided dolphins are undoubtedly higher in the wild than in captivity due to relative differences in their respective behaviors in the two environments. However, relative seasonal changes in energy requirements are likely to be independent of living conditions and have implications for estimating the energy requirements of Pacific white-sided dolphins in the wild.
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Energy requirements of Pacific white-sided dolphins (Lagenorhynchus obliquidens) as predicted by a bioenergetic model.
Rechsteiner, E. U., D. A. S. Rosen and A. W. Trites. 2013.
Journal of Mammalogy 94:820-832.
abstract
Apex predators such as Pacific white-sided dolphins (Lagenorhynchus obliquidens) have the potential to impact prey populations and to be affected by changes in prey abundance. As an abundant predator that ranges widely across the North Pacific Ocean, their interactions with prey populations may have conservation implications. We estimated the energy required by individual Pacific white-sided dolphins using a bioenergetic model that accounted for different age classes and reproductive stages (calf, juvenile, adult, pregnant and lactating). Monte Carlo simulations incorporating variability in model parameters (body mass, growth rate, costs of gestation and lactation, metabolic rate, cost of activity, and assimilation efficiencies) were used to predict ranges in energetic requirements. Mean (±SD) total energy requirements in MJ day-1 were 40.3 ± 6.2 for calves, 70.8 ± 8.2 for juveniles, 69.0 ± 3.6 for adults, 70.3 ± 3.6 for pregnant females, and 98.4 ± 20.0 for lactating femal es. Estimates of energy requirements were most sensitive to uncertainty in values used for resting metabolic rates and energetic costs of activity. Estimated mass-specific energy requirements in MJ kg-1 day-1 were elevated in calves (1.55 ± 0.23), juveniles (0.97 ± 0.11) and lactating females (1.01 ± 0.21) when compared with non-reproductive adults and pregnant females (~0.71 ± 0.04). Based on a high-energy density diet, an average sized dolphin (78 kg) would consume approximately 12.5 - 15.8 kg of fish or 15-20% of its body weight per day. These high energetic requirements may indicate a reliance of dolphins on energy rich prey, which has implications for fisheries management and conservation of marine mammals.
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Seasonal resting metabolic rate and food intake of captive Pacific white-sided dolphins (Lagenorhynchus obliquidens).
Rechsteiner, E.U., D.A.S. Rosen and A.W. Trites. 2013.
Aquatic Mammals. 39:241-252.
abstract
Like many marine mammals, Pacific white-sided dolphins (Lagenorhynchus obliquidens) consume prey that change seasonally in numbers, distribution, and energy density. However, it is not known whether these ecological factors are associated with underlying seasonal changes in energy requirements. We investigated these potential seasonal shifts in physiology by measuring resting metabolic rate (a conserved physiological trait) and recording associated daily food energy intake of three captive adult Pacific white-sided dolphins over 12 consecutive months. Two dolphins that met the criteria for measuring resting metabolism had a mean (± SE) mass-specific rate of 0.31 ± 0.0047 MJ kg-1 day- 1 (~34 MJ day-1), which was higher than that of other species of small cetaceans. Resting metabolic rates of Pacific white-sided dolphins did not vary seasonally and, hence, were not related to observed seasonal changes in water or air temperature, total energy intake, or body mass. Overall, resting metabolism accounted for ~70% of total energy intake. However, total food energy intake changed seasonally and was highest during the fall (October to December). While levels of food intake were not predicted by resting metabolic rate, body mass, or water and air temperatures, the increased intake in the fall resulted in the seasonal increase in body mass exhibited by all three dolphins. Our estimates of resting metabolic rates and relative changes in total energy intake can be used to parameterize bioenergetic models needed to estimate the ecological impacts and energetic requirements of Pacific white-sided dolphins in the wild, which will have conservation implications.

keywords     energetics, oxygen consumption, Pacific white-sided dolphins, season, food intake, metabolic rate
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Seismic operations have variable effects on dive-cycle behavior of bowhead whales in the Beaufort Sea.
Robertson, F.C., W.R. Koski, T.A. Thomas, W.J. Richardson, B. Würsig, and A.W. Trites. 2013.
Endangered Species Research 21:143-160.
abstract
The surfacing, respiration and diving (SRD) behavior of bowhead whales Balaena mysticetus changes upon exposure to seismic operations. However, it is unknown whether these changes differ by season, reproductive status (calves, mothers, and non-calves), and whale activity (traveling, foraging, or socializing). Such SRD behavioral responses to seismic operations might influence the detectability of whales during aerial surveys. We addressed these questions by applying non-parametric univariate tests and linear mixed models to behavioral data collected by aerial observation of bowheads in the Beaufort Sea from 1980 to 2000. Durations of surfacings decreased upon exposure to seismic operations, especially for traveling or socializing non-calf whales. The mixed models also indicated that dive durations were affected by the presence of seismic operations, but the effects depended on other variables such as season and whale activity. Overall, our results suggest that changes in the behavior exhibited by bowhead whales exposed to seismic operations are context-dependent (i.e. responses to seismic operations depend on both the circumstance and activity of the whale). The level of perceived threat may also be important based on similarities with behavioral changes observed in other air-breathing aquatic foragers facing dangers. We conclude that seismic-induced changes in bowhead SRD behaviors may affect the availability of bowhead whales for visual detection in some circumstances. This in turn means that estimates of abundance and distribution of bowhead whales near seismic surveys should be context-sensitive and incorporate correction factors that account for sound exposure, season, reproductive status, and whale activity.

keywords     Bowhead whale, Behavior, Disturbance, Seismic operations,Beaufort Sea,Aerial surveys, Sightability
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Resting metabolic rate of a mature male Beluga whale (Delphinapterus leucas).
Rosen, D.A.S. and A.W. Trites. 2013.
Aquatic Mammals 39:85-88.
abstract
We conducted repeated measurements of rates of oxygen consumption on a mature (~17 yrs) male beluga whale held at the Vancouver Aquarium, and trained to rest quietly at the surface of his holding pool underneath a specially designed floating dome that completely contained the portion of his body above the water line. Each trial lasted ~20 minutes prior to the morning feed, and rates of oxygen consumption were calculated over the last 10 minutes of each trial. The average metabolic rate over 11 trials was 73,050 ± 2290 kJ d-1 (Mean ± S.E.). This translated into approximately 54.48 ± 1.71 kJ kg-1 d-1, which was approximately 1.13 ± .035 times the predicted value for a similarly-sized terrestrial mammal. This was statistically greater than 1.0, but did not approach the much higher values reported for many other small cetacean species.
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2012
 
Distribution and relative abundance of humpback whales in relation to environmental variables in coastal British Columbia and adjacent waters.
Dalla Rosa, L., J.K. Ford and A.W. Trites. 2012.
Continental Shelf Research 36:89-104.
abstract
Humpback whales are common in feeding areas off British Columbia (BC) from spring to fall, and are widely distributed along the coast. Climate change and the increase in population size of North Pacific humpback whales may lead to increased anthropogenic impact and require a better understanding of species-habitat relationships. We investigated the distribution and relative abundance of humpback whales in relation to environmental variables and processes in BC waters using GIS and generalized additive models (GAMs). Six non-systematic cetacean surveys were conducted between 2004 and 2006. Whale encounter rates and environmental variables (oceanographic and remote sensing data) were recorded along transects divided into 4 km segments. A combined 3-year model and individual year models (two surveys each) were fitted with the mgcv R package. Model selection was based primarily on GCV scores. The explained deviance of our models ranged from 39% for the 3-year model to 76% for the 2004 model. Humpback whales were strongly associated with latitude and bathymetric features, including depth, slope and distance to the 100-m isobath. Distance to sea-surface-temperature fronts and salinity (climatology) were also constantly selected by the models. The shapes of smooth functions estimated for variables based on chlorophyll concentration or net primary productivity with different temporal resolutions and time lags were not consistent, even though higher numbers of whales seemed to be associated with higher primary productivity for some models. These and other selected explanatory variables may reflect areas of higher biological productivity that favor top predators. Our study confirms the presence of at least three important regions for humpback whales along the BC coast: south Dixon Entrance, middle and southwestern Hecate Strait, and the area between La Perouse Bank and the southern edge of Juan de Fuca Canyon.
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Growth and rapid early development of North Atlantic right whales (Eubalaena glacialis).
Fortune, S.M.E., A.W. Trites, W.L. Perryman, M.J. Moore, H.M. Pettis and M.S. Lynn. 2012.
Journal of Mammalogy 93:1342-1354.
abstract
Body growth of North Atlantic right whales (Eubalaena glacialis) was described from measurements of known- age live and dead individuals to gain insights into the nutritional needs and life-history strategies of this endangered species. Body lengths from 154 individuals revealed that calves more than doubled in size and attained three-fourths of asymptotic adult size by the time they had weaned at 12 months. Calves gained on average ~1.7 cm and ~34 kg per day while nursing during this extremely rapid growth phase. Mean predicted lengths and weights were 4.2 m and 1.1 metric tons (mt) at birth, 10.3 m and 13.5 mt at weaning, and 13.6 m and 29.6 mt when fully grown. Growth of right whales was best described using a 2-phased Gompertz growth model and could not be fit using any of the single continuous growth models commonly used for other mammals. Rapid growth during dependency may minimize the risk of predation and maximize calf survival. Rapid calf growth also may maximize development of the mouth and baleen to optimize foraging efficiency of juveniles at the time of weaning, as well as improve reproductive fitness by reducing the age at which sexual maturity is attained. However, transferring the amount of energy needed to support the rapid postnatal growth of North Atlantic right whales may ultimately affect the intervals between pregnancies (.3 years) of mature females.

keywords     Eubalaena glacialis, growth models, length, mass, reproductive costs, right whale
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Mechanical reliability of devices subdermally implanted into the young of long lived and endangered wildlife.
Hori, B., R.J. Petrell, G. Fernlund and A.W. Trites. 2012.
Journal of Materials Engineering and Performance. 21:1924-1931.
abstract
Service data does not exist for the strength of enclosures for subdermally implanted biotelemetry devices intended for young wild animals. Developing adequate tests especially for implants intended for endangered species is difficult due to the very limited availability of live animals and cadaverous tissue, ethical concerns about using them, and high enclosure costs. In this research, these limitations were overcome by taking a conservative approach to design and testing. Reliability tests were developed and performed to establish the likelihood that a thin subdermally and cranially implanted alumina enclosure would fail due to typical external forces related to diving, fights, and falls over the expected 30-year life time of sea lions. Cyclic fatigue tests indicative of deep dives performed out of tissue and at the 90% reliability level indicated no failure after 70,000 stress cycles at stresses of approximately 15 MPa; dynamic fatigue tests indicated a 5% probability of failure at 250 MPa; and puncture tests indicative of fight bites showed a 5% probability of failure at 1500 N. These values were far outside of what the animals might expect to encounter in real life. On the other hand, the response of the enclosure to impact outside of the tissue was failure at a mean energy level of 6.7 J. Modeling results predict that head impacts due to trampling by fighting sea lion males and falls over 1 m onto a rocky ledge typical of haul out environments would likely fracture an infant‚s head as well as the implant. The device can be implanted under an impact absorbing 1 cm blubber layer for extra protection. More service data for enclosures can be made more available despite limited availability of test animals if a conservative approach to testing is taken.

keywords     alumina, biomaterials, biotelemetry, mechanical testing, Sea Lion, structural ceramics
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Rates of maximum food intake in young northern fur seals (Callorhinus ursinus) and the seasonal effects of food intake on body growth.
Rosen, D., B.L. Young and A.W. Trites. 2012.
Canadian Journal of Zoology 90:61-91.
abstract
Accurate estimates of food intake and its subsequent affect on growth are required to understand the interaction between an animals‚ physiology and its biotic environment. We determined how food intake and growth of 6 young northern fur seals (Callorhinus ursinus L., 1758) responded seasonally to changes in food availability. Animals were given unrestricted access to prey for 8 hr per day on either consecutive days or on alternate days only. We found animals offered ad libitum food on consecutive days substantially increased their food intake over normal Œtraining‚ levels. However, animals that fasted on alternative days were unable to compensate by further increasing their levels of consumption on subsequent feeding days. Absolute levels of food intake were highly consistent during winter and summer trials (2.7 ˆ 2.9 kg d-1), but seasonal differences in body mass meant that fur seals consumed more food relative to their body mass in summer (~27%) than in winter (~20%). Despite significant increases in absolute food intake during both seasons, the fur seals did not appear to efficiently convert this additional energy into mass growth, particularly in the winter. These seasonal differences in conversion efficiencies and estimates of maximum intake rates can be used to generate physiologically realistic predictions about the effect of changes in food availability on an individual fur as well as the consequences for an entire population.
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Cost of living dictates what whales, dolphins and porpoises eat: the importance of prey quality on predator foraging strategies.
Spitz, J., A.W. Trites, V. Becquet, A. Brind'Amour, Y. Cherel, R. Galois and V. Ridoux. 2012.
PLoS ONE. Vol 7(11):e50096.
abstract
Understanding the mechanisms that drive prey selection is a major challenge in foraging ecology. Most studies of foraging strategies have focused on behavioural costs, and have generally failed to recognize that differences in the quality of prey may be as important to predators as the costs of acquisition. Here, we tested whether there is a relationship between the quality of diets (kJ g-1) consumed by cetaceans in the North Atlantic and their metabolic costs of living as estimated by indicators of muscle performance (mitochondrial density, n = 60, and lipid content, n = 37). We found that the cost of living of 11 cetacean species is tightly coupled with the quality of prey they consume. This relationship between diet quality and cost of living appears to be independent of phylogeny and body size, and runs counter to predictions that stem from the well-known scaling relationships between mass and metabolic rates. Our finding suggests that the quality of prey rather than th e sheer quantity of food is a major determinant of foraging strategies employed by predators to meet their specific energy requirements. This predator-specific dependence on food quality appears to reflect the evolution of ecological strategies at a species level, and has implications for risk assessment associated with the consequences of changing the quality and quantities of prey available to top predators in marine ecosystems.
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A review of the effects of different marking and tagging techniques on marine mammals.
Walker, K. A., A. W. Trites, M. Haulena and D. M. Weary. 2012.
Wildlife Research 59:15-30.
abstract
Wildlife research often requires marking and tagging animals to collect data on survival, reproduction, movement, behaviour and physiology. Identification of individual marine mammals can be carried out using tags, brands, paint, dye, photogrammetry, telemetry and other techniques. An analysis of peer-reviewed articles published from January 1980 to April 2011 addressing the effects of marking revealed a preponderance of studies focussed on short-term effects such as injuries and behavioural changes. Some marking techniques were reported to cause pain and to change swimming and haul-out behaviour, maternal attendance, and duration of foraging trips. However,marking has typically not been found to affect survival. No published research has addressed other possible long-term effects of marking related to injuries or pain responses. Studies of the more immediate effects of marking (mostly related to externally attached devices such as radio-transmitters) have shown a variety of different types and magnitudes of responses. It is important to note that studies failing to find treament differences are less likely to be published, meaning that the present and any other reviews based on published literaturemay be a biased sample of all research conducted on the topic. Publishing results that found no or low impacts (i.e. best practices) as well as those that found significant impacts on animals should both be encouraged. Future research under more controlled conditions is required to document acute effects of marking, including injury and pain, and to better understand longer-term effects on health, reproduction and survival. We recommend that studies using marked animals standardise their reports, with added detail on methodology, monitoring and sampling design, and address practices used to minimise the impact of marking on marine mammals.
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2011
 
An independent, scientific review of the Biological Opinion (2010) of the National Marine Fisheries Service Fisheries Management Plan for the Bering Sea/Aleutian Islands management areas.
Bernard, D.R., S.J. Jeffries, G. Knapp, and A.W. Trites. 2011.
Alaska Department of Fish and Game Special Publication 11-16. pp. 136
abstract
This special publication contains the final report of an independent scientific and economic review of a Biological Opinion (BiOp) issued 24 November, 2010 by the National Marine Fisheries Service (NMFS) on the Fisheries Management Plan (FMP) for the Bering Sea and Aleutian Islands (BSAI) Management Area under a section 7 consultation required by the Endangered Species Act. The BiOp involved the western distinct population segment (WDPS) of Steller sea lions Eumetopias jubatus, the conclusion of which is a finding that fisheries in the western and central Aleutian Islands placed the WDPS in jeopardy of recovery through adverse modification of habitat. The review panel evaluated the scientific evidence and argument given in support of this finding against the scientific requirements of the Endangered Species Act based on consistency, validity, and biologic relevance. The review panel also evaluated the economic analyses that formed the basis for the reasonable and prudent actions arising from the finding. The review panel followed only the terms of reference as published in this final report, and in their deliberations, considered written testimony and testimony provided at two public meetings, one in Seattle on June 2, 2011, and the other in Anchorage on August 22, 2011. The conclusions of the review panel can be found in total in the executive summary and in part at the end of each chapter of the special publication.
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Proportion of prey consumed can be determined from faecal DNA using real-time PCR.
Bowles, E., P.M. Schulte, D.J. Tollit, B.E. Deagle and A.W. Trites. 2011.
Molecular Ecology Resources 11:530-540.
abstract
Reconstructing the diets of pinnipeds by visually identifying prey remains recovered in faecal samples is challenging because of differences in digestion and passage rates of hard parts. Analyzing the soft-matrix of faecal material using DNA-based techniques is an alternative means to identify prey species consumed, but published techniques are largely non-quantitative, which limits their usefulness for some studies. We further developed and validated a real-time PCR technique using species-specific mitochondrial DNA primers to quantify the proportion of prey in the diets of Steller sea lions (Eumetopias jubatus), a pinniped species thought to be facing significant diet related challenges in the North Pacific. We first demonstrated that the proportions of prey tissue DNA in mixtures of DNA isolated from four prey species could be estimated within a margin of ~12% of the percent in the mix. These prey species included herring Clupea palasii, eulachon Thaleichthyes pacificus, squid Loligo opalescens and rosethorn rockfish Sebastes helvomaculatus. We then applied real-time PCR to DNA extracted from faecal samples obtained from Steller sea lions in captivity that were fed 11 different combinations of herring, eulachon, squid and Pacific ocean perch rockfish (Sebastes alutus), ranging from 7-75% contributions per meal (by wet weight). The difference between the average percentage estimated by real-time PCR and the percentage of prey consumed was generally less than 12% for all diets fed. Our findings indicate that real-time PCR of faecal DNA can detect the approximate relative quantity of prey consumed for complex diets and prey species, including cephalopods and fish.
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Predation on Fraser River sockeye salmon.
Christensen, V. and A.W. Trites. 2011.
In Cohen Commission Technical Report. www.cohencommission.ca. Vancouver, B.C. pp. 129
abstract
A review of the available scientific literature reveals a wide range of species holding the remains of sockeye salmon in their stomachs, but only a few of these predators have specialized in targeting sockeye, and there are no studies showing that a predator has consumed sufficient numbers over the past three decades to pose a population threat to sockeye salmon. There is no sign of a smoking gun among the long list of potential predators of Fraser River sockeye salmon. In the open ocean, sockeye salmon appear to draw the predatory attention of salmon sharks, blue sharks, and an obscure species fittingly called daggertooth. All three species likely increased in recent decades (after the 1992 UN ban on driftnet fisheries) ˜ and two of them (salmon sharks and daggertooth) may favor sockeye. Unfortunately, data for these species is also too sparse to draw conclusions about their otential role in the poor return of Fraser River sockeye in 2009, but their life histories suggest relatively stable numbers that should not have exerted greater predation upon sockeye in any single year relative to others. In addition to the daggertooth and sharks, marine mammals also consume adult sockeye salmon. However, sockeye are not an important part of marine mammal diets compared to the other species of salmon. No studies have reported marine mammals consuming sockeye salmon in the open ocean. However, small amounts of sockeye have been found in the stomachs or fecal samples collected from Steller sea lions, northern fur seals, harbour seals, killer whales, and white-sided dolphins feeding over the continental shelf and inside waters of British Columbia. Seal and sea lion populations have increased significantly in British Columbia and southeast Alaska since the late 1970s. However, the available data indicate that sockeye salmon is not a preferred prey species among marine mammals.
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Convergent evolution in locomotory patterns of flying and swimming animals.
Gleiss, A.C., S.J. Jorgensen, N. Liebsch, J.E. Sala, B. Norman, G.C. Hays, F. Quintana, E. Grundy, C. Campagna, A.W. Trites, B.A. Block and R.P. Wilson. 2011.
Nature Communications Vol 2:352
abstract
Locomotion is one of the major energetic costs faced by animals and various strategies have evolved to reduce its cost. Birds use interspersed periods of flapping and gliding to reduce the mechanical requirements of level flight while undergoing cyclical changes in flight altitude, known as undulating flight. Here we equipped free-ranging marine vertebrates with accelerometers and demonstrate that gait patterns resembling undulating flight occur in four marine vertebrate species comprising sharks and pinnipeds. Both sharks and pinnipeds display intermittent gliding interspersed with powered locomotion. We suggest, that the convergent use of similar gait patterns by distinct groups of animals points to universal physical and physiological principles that operate beyond taxonomic limits and shape common solutions to increase energetic efficiency. Energetically expensive large-scale migrations performed by many vertebrates provide common selection pressure for efficient locomotion, with potential for the convergence of locomotory strategies by a wide variety of species.
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Cohort effects and spatial variation in age-specific survival of Steller sea lions from southeastern Alaska.
Hastings, K.K., L.A. Jemison, T.S Gelatt, J.L. Laake, G. Pendelton, J.C. King, A.W. Trites and K.W. Pitcher. 2011.
Ecosphere 2 Vol 111
abstract
Information concerning mechanistic processes underlying changes in vital rates and ultimately population growth rate is required to monitor impacts of environmental change on wildlife. We estimated age-specific survival and examined factors influencing survival for a threatened population of Steller sea lions (Eumetopias jubatus) in southeastern Alaska. We used mark-recapture models and data from 1,995 individuals marked at approximately one month of age at four of five rookeries in southeastern Alaska, and resighted from Oregon to the Bering Sea. Average annual survival probability for females was .64 for pups and 0.77 for yearlings, and increased from 0.91 to 0.96 from age 3ˆ7 yrs. Annual survival probability of males averaged 0.60 for pups and 0.88 by 7 yrs, resulting in probability of survival to age 7, 33% lower for males compared to females. Pups from northern southeastern Alaska (including an area of low summer population size but rapid growth) were twice as likely to survive to age 7 compared to pups from southern rookeries (including a large, historical, stable rookery). Effects of early conditions on future fitness were observed as (1) environmental conditions in the birth year equally affected first- and second year survival, and (2) effects of body mass at approximately one month of age were still apparent at 7 yrs. Survival from 0ˆ2 yrs varied among five cohorts by a maximum absolute difference of 0.12. We observed survival costs for long-distance dispersal for males, particularly as juveniles. However, survival was higher for non-pups that dispersed to northern southeastern Alaska, suggesting that moving to an area with greater productivity, greater safety, or lower population size may alleviate a poor start and provide a mechanism for spatial structure for sea lion populations.
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South American sea lions in Peru have a lek-like breeding system.
Soto, K.H. and A.W. Trites. 2011.
Marine Mammal Science 307:306-333.
abstract
Five years of behavioral observations revealed significant effects of high air temperatures and breeding site topography on the mating system of South American sea lions in Peru. Unlike most polygynous mammals that defend females or fixed territories, male sea lions in Peru maintained positions along the shoreline where females passed each day to thermoregulate, and where most copulations occurred. Sex ratios (1 male per 17 females) and male mating success were extremely skewed (14% of males achieved 50% of the copulations, and 25% of them did not copulate at all). The mass daily movements of females toward the water and cool substrate of the shoreline, along with a highly skewed sex ratio, accentuated the difficulty for males to monopolize and restrict female movements. Femalesmoved freely and chose their mates, unlike in temperate regions of their range where male South American sea lions control groups of females or access to tide pools. Our observations indicate that the South American sea lion in Peru has a lek-like breeding system. This is a rare alternative to the common male strategies of defending females and resources, and is likely an evolutionary product of their highly skewed sex ratio, protracted breeding season, and the extreme subtropical climate where they breed.
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Dive behaviour impacts the ability of heart rate to predict oxygen consumption in Steller sea lions (Eumetopias jubatus) foraging at depth.
Young, B. L., D. A. S. Rosen, A. G. Hindle, M. Haulena and A. W. Trites. 2011.
Journal of Experimental Biology 214:2267-2275.
abstract
The predictive relationship between heart rate (fH) and oxygen consumption (VO2) has been derived for several species of marine mammals swimming horizontally or diving in tanks to shallow depths. However, it is unclear how dive activity affects the fH:VO2 relationship and whether the existing equations apply to animals diving to deeper depths. We investigated these questions by simultaneously measuring the fH and VO2 of Steller sea lions (Eumetopias jubatus) under different activity states (surface resting or diving), types of dives (single dives or dive bouts), and depths (10 or 40m). We examined the relationship over dives only and also over dive cycles (dive + surface interval). We found that fH could only predict VO2 over a complete single dive cycle or dive bout cycle (i.e. surface intervals had to be included). The predictive equation derived for sea lions resting on the surface did not differ from that for single dive cycles. However, the equation derived over dive bout cycles multiple dives + surface intervals) differed from those for single dive cycles or surface resting, with similar fH for multiple dive bout equations yielding higher predicted VO2 than that for single dive bout cycles (or resting). The fH:VO2 relationships were not significantly affected by dive duration, dive depth, water temperature or cumulative food consumed under the conditions tested. Ultimately, our results demonstrate that fH can be used to predict activity-specific metabolic rates of diving Steller sea lions, but only over complete dive cycles that include a post-dive surface recovery period.
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Environment and feeding change the ability of heart rate to predict metabolism in resting Steller sea lions (Eumetopias jubatus).
Young, B. L., D.A.S. Rosen, M. Haulena, A. G. Hindle and A.W. Trites. 2011.
Journal of Comparative Physiology-B 118:105-116.
abstract
The ability to use heart rate (fh) to predict oxygen consumption rates (VO2) in Steller sea lions and other pinnipeds has been investigated in fasting animals. However, it is unknown whether established fh:VO2 relationships hold under more complex physiological situations, such as when animals are feeding or digesting. We assessed whether fh could accurately predict VO2 in trained Steller sea lions while fasting and after being fed. Using linear mixed-effects models, we derived unique equations to describe the fh:VO2 relationship for fasted sea lions resting on land and in water. Feeding did not significantly change the fh:VO2 relationship on land. However, Steller sea lions in water displayed a different fh:VO2 relationship after consuming a 4 kg meal compared to the fasting condition. Incorporating comparable published fh:VO2 data from Steller sea lions showed a distinct effect of feeding after a 6 kg meal. Ultimately, our study illustrated that both feeding and physical environment are statistically relevant when deriving VO2 from telemetered fh, but that only environment affects the practical ability to predict metabolism from fh. Updating current bioenergetic models with data gathered using these predictive fh:VO2 equations will yield more accurate estimates of metabolic rates of free-ranging Steller sea lions under a variety of physiological, behavioral, and environmental states.
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2010
 
Swimming depth and ocean currents affect transiting costs in Steller sea lions (Eumetopias jubatus).
Hindle, A.G., D.A.S. Rosen and A.W. Trites. 2010.
Aquatic Biology 10:139-148.
abstract
Transit costs associated with commuting between resting sites ashore and foraging areas at sea are an appreciable portion of foraging expenditures in pinnipeds. We examined transit swimming in three Steller sea lions (Eumetopias jubatus) trained to follow a moving boat at different speeds and depths. We measured dive behavior (duration) and focused specifically on activity measures (fore-flipper stroking and ODBA, an overall measure of body motion), which may be proxies for metabolic expenditure. Sea lions appeared to increase efficiency while transiting at depths that approached three times their body diameters (mean depth = 151 ± 1 cm SEM, n = 87). Although the response was not uniform for all tested scenarios, all of the significant adjustments we observed to dive behavior and swimming mechanics supported an increased efficiency at this depth. An increase in transit speed (4.5 versus 3.5 knots surface speed) was associated with elevated flipper stroke frequencies (+5%) and stroke output (ODBA•stroke-1, +48%). Sea lions transiting against the flow of a tidal current had reduced dive durations (-10%), while total ODBA was consistently elevated (+8% overall). This response to tidal flow was accompanied either by elevated ODBA•stroke-1 (3.5 knots) or a parallel increase in stroking (4.5 knots). Our data demonstrate that small changes in the physical environment affect transiting in Steller sea lions, and imply that altered prey fields or changing ocean conditions can carry energetic consequences.
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Dive response differs between shallow- and deep-diving Steller sea lions (Eumetopias jubatus).
Hindle, A.G., B.L. Young, D.A.S. Rosen, M. Haulena and A.W. Trites. 2010.
Journal of Experimental Marine Biology and Ecology 394:141-148.
abstract
Muscle exercise correlates with oxygen use, tissue perfusion and heart rate (fH) in terrestrial animals, but the relationship between these physiological processes is less clear in diving animals. We found the mean heart rate of Steller sea lions trained to voluntarily dive to depths up to 40m dropped by 40% while diving, and noted that mean bradycardia was 9% greater during shallow (10m) compared to deep (40m) dives. Longer dives resulted in lower heart rates, but only when they were shallow; on the other hand, minimum instantaneous fH decreased consistently with dive duration. In general, instantaneous fH did not reflect activity over short timescales. Our data suggest that our sea lions invoked a different dive response depending on whether they dove to shallow or deep depths. During shallow (10m) dives only, the correlation between activity and fH was indicative of vascular compromise between diving and exercise. However, during deep dives (40m), there was no such correlation, suggesting that locomotory activity was uncoupled from dive bradycardia, which was possibly mediated by an absence of blood flow to active muscle. For both diving scenarios, surface fH correlated with dive activity, suggesting that some underwater locomotory costs were deferred to the post-dive surface interval. Ultimately, our data support the speculation that Steller sea lion locomotory muscles become hypoxic during diving, regardless of dive depth.
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Fecal triiodothyronine and thyroxine concentrations change in response to thyroid stimulation in Steller sea lions (Eumetopias jubatus).
Keech, A.L., D.A.S. Rosen, R.K. Nelson Booth, A.W. Trites and S.K. Wasser. 2010.
General and Comparative Endocrinology 166:180-185.
abstract
Variation in concentrations of thyroid hormones shed in feces may help to identify physiological states of animals, but the efficacy of the technique needs to be validated for each species. We determined whether a known physiological alteration to thyroid hormone production was reflected in hormone concentrations in the feces of Steller sea lions (Eumetopias jubatus). We quantified variation of triiodothyronine (T3) and thyroxine (T4) concentrations in feces following two intramuscular injections of thyrotropin (thyroid-stimulating hormone, TSH) at 24 h intervals in four captive female sea lions. We found fecal T3 concentrations increased 18-57% over concentrations measured in the baseline sample collected closest to the time of the first TSH injection (p=0.03) and 1-75% over the mean baseline concentration (p=0.12) for each animal of all samples collected prior to injections. The peak T3 response occurred 48 h post injection in three animals and 71 h in the fourth. Post-injection T4 concentrations did not differ between the baseline sample collected closest to the time of the first TSH injection (p=0.29) or the mean baseline concentration (p=0.23) for each animal. These results indicate that induced physiological alterations to circulating thyroid hormone concentrations can be adequately detected through analyses of fecal T3 concentrations and that the technique may provide a means of non-invasively detecting metabolic changes in Steller sea lions.
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Growth rates and differential investment in male and female Juan Fernández fur seal pups.
Osman, L.P., C.A. Moreno and A.W. Trites. 2010.
Journal of Mammalogy 91:1188-1196.
abstract
Male Juan Fernández fur seals (Arctocephalus philippii) are significantly larger than females at birth and show extreme dimorphism as adults. We investigated morphological differences among male and female pups using a cross-sectional sampling design to evaluate whether pup growth rates during the breeding season were sex-specific. We characterized growth rates using mass, length, and girth and found that length was the least variable measure of body growth (based on the coefficients of variation for the three measures of body size). Male pups were heavier on average than female pups on any given day of sampling but did not grow faster than females. No significant differences were noted in the body conditions of male and female pups. These findings suggest that the sexual differences among A. philippii pups originate before birth and are not accentuated while suckling during the breeding season.
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Prey capture attempts can be detected in Steller sea lions and other marine predators using accelerometers.
Viviant, M., A.W. Trites, D.A.S. Rosen, P. Monestiez and C. Guinet. 2010.
Polar Biology 33:713-719.
abstract
We attached accelerometers to the head and jaw of a Steller sea lion (Eumetopias jubatus) to determine whether feeding attempts in a controlled setting could be quantified by acceleration features characteristic of head and jaw movements. Most of the 19 experimental feeding events that occurred during the 51 dives recorded resulted in specific acceleration patterns that were clearly distinguishable from swimming accelerations. The differential acceleration between the head-mounted and jaw-mounted accelerometers detected 84% of prey captures on the vertical axis and 89% on the horizontal axis. However, the jaw-mounted accelerometer alone proved to be equally effective at detecting prey capture attempts. Acceleration along the horizontal (surge)-axis appeared to be particularly efficient in detecting prey captures, and suggests that a single accelerometer placed under the jaw of a pinniped is a promising and easily implemented means of recording prey capture attempts.
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2009
 
Lamination for subdermal implant fixation.
Hori, B.D., R.J. Petrell, A.W. Trites, and T. Godbey. 2009.
Journal of Biomedical Materials Research: Part B - Applied Biomaterials 91B:17-25.
abstract
hirty-six aluminum oxide laminated discs were implanted into 12 young rabbits (18 with a 0.5 mm porous layer and 18 with 1 mm) to determine whether implants that are porous only on one side could fixate to subcutaneous tissue. After 3 months, discs were encased within thin pouches (0.02-0.14 mm) of fibrous connective tissue, as would have been expected of a completely porous implant. Solid sides showed no while the porous sides showed little attachment to pouches. 47% (17) of the discs had moved 1.4±0.8 cm beyond the 4.7 + 1 cm they had moved due to normal skin growth, while two others had moved between 6.2 and 6.5 cm beyond this measure. The proportion of 1 mm porous layer discs migrating within subcutaneous tissue was no greater than the proportion of 0.5 mm layer discs migrating (p=0.15). Porous layer height and disc migration did not affect the attachment strength of pouch to surrounding tissues (68 ±23 N, p=0.34). Pouch thickness, which has been associated to the level of applied forces in other studies, increased with migration distance (p=0.054). Results indicate that one sided porous disks are likely easier to retrieve than completely porous ones, but cannot be prevented from migrating in loose tissue of young animals. Data is being used to design subdermal radio frequency devices for endangered marine animals.
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Changes in glucocorticoids, IGF-I and thyroid hormones as indicators of nutritional stress and subsequent refeeding in Steller sea lions (Eumetopias jubatus).
Jeanniard du Dot, T., D.A.S. Rosen, J.P. Richmond, A.S. Kitaysky, S.A. Zinn and A.W Trites. 2009.
Comparative Biochemistry and Physiology, Part A 152:524-534.
abstract
Physiological responses to changes in energy balance are tightly regulated by the endocrine system through glucocorticoids, IGF-I and thyroid hormones. Changes in these hormones were studied in eight captive female Steller sea lions that experienced changes in food intake, body mass, body composition, and blood metabolites during summer and winter. During a period of energy restriction, one group of sea lions was fed reduced amounts of Pacific herring and another was fed an isocaloric diet of walleye pollock, after which both groups returned to their pre-experimental diets of herring. Cortisol was negatively and IGF-I was positively associated with changes in body mass during periods of energy restriction (mass loss associated with increase in cortisol and decrease in IGF-I) and refeeding (body mass maintenance associated with stable hormone concentrations in summer and compensatory growth linked to decrease in cortisol and increase in IGF-I in winter). Cortisol and IGF-I were also correlated with changes in lipid and lean mass, respectively. Consequently, these two hormones likely make adequate biomarkers for nutritional stress in sea lions, and when combined provide indication of the energetic strategy (lipid vs lean mass catabolism) animals adopt to cope with changes in nutrient intake. Unlike type of diet fed to the sea lions, age of the animals also impacted hormonal responses, with younger animals showing more intense hormonal changes to nutritional stress. Thyroid hormones, however, were not linked to any physiological changes observed in this study.
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Energy reallocation during and after periods of nutritional stress in Steller sea lions: low-quality diet reduces capacity for physiological adjustments.
Jeanniard du Dot, T., D.A.S Rosen and A.W. Trites. 2009.
Physiological and Biochemical Zoology 89:516-530.
abstract
Two groups of female Steller sea lions (Groups H and P) were subjected to periods of energy restriction and subsequent re-feeding during winter and summer to determine changes in energy partition among principal physiological functions and the potential consequences to their fitness. Both sea lion groups consumed high-quality fish (herring) before and after the energy restrictions. During restrictions, Group H was fed a lower quantity of herring and Group P a caloric equivalent of low-quality fish (pollock). Quantitative estimates of maintenance and production energies and qualitative estimates of thermoregulation, activity and basal metabolic rate were measured. During summer, all animals compensated for the imposed energy deficit by releasing stored energy (production energy). Group H also optimized the energy allocation to seasonal conditions by increasing activity during summer when fish are naturally abundant (foraging effort) and by decreasing thermoregulation capacity when waters are warmer. During winter, both groups decreased the energy allocated to overall maintenance functions (basal metabolic rate, thermoregulation and activity together) in addition to releasing stored energy, but preserved thermoregulatory capacity. Group H also decreased activity levels in winter when foraging in the wild is less efficient, unlike Group P. Overall, sea lions fed pollock did not change energy allocation to suit environmental conditions as readily as those fed herring. This implies that low energy density diet may further reduce fitness of animals in the wild during periods of nutritional stress.
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Seasonal differences in biochemical adaptation to fasting in juvenile and subadult Steller sea lions (Eumetopias jubatus).
Rea, L.D., M. Berman-Kowalewski, D.A.S. Rosen, and A. W.Trites. 2009.
Physiological and Biochemical Zoology 82:236-247.
abstract
Nine Steller sea lions (Eumetopias jubatus) aged 1.756 yr were experimentally fasted for 714 d during the breeding and nonbreeding seasons to identify changes in plasma metabolites that are indicative of fasting and to determine whether the ability of sea lions to fast varies seasonally or with age. Although some animals approached the limit of their protein-sparing ability by the end of our fasting experiments, there was no sign of irreversible starvation biochemistry. Plasma blood urea nitrogen (BUN) concentrations decreased in all animals within the first week of fasting, reflecting a shift to a fasting-adapted state; however, significant increases in plasma BUN concentration at the end of the nonbreeding season fasts suggest that subadult Steller sea lions were not able to maintain a protein-sparing metabolism for a full 14 d during the nonbreeding season. In contrast, juveniles were able to enter protein sparing sooner during the nonbreeding season when they had slightly higher initial percent total body lipid stores than during the breeding season. Subadult and juvenile sea lions had low circulating ketone body concentrations compared with young sea lion pups, suggesting an age-related difference in how body reserves are utilized during fasting or how the resulting metabolites are circulated and catabolized. Our data suggest that metabolite concentrations from a single blood sample cannot be used to accurately predict the duration of fast; however, threshold metabolite concentrations may still be useful for assessing whether periods of fasting in the wild are unusually long compared with those normally experienced.
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Steller sea lion foraging response to seasonal changes in prey availability.
Sigler, M.F., D.J. Tollit, J.J. Vollenweider, J.F. Thedinga, D.J. Csepp, J.N. Womble, M.A. Wong, M.J. Rehberg and A.W. Trites. 2009.
Marine Ecology Progress Series 388:243-261.
abstract
We hypothesized that: (1) Steller sea lion Eumetopias jubatus diet choice is a function of prey availability, (2) sea lions move to take advantage of times and locations of seasonal prey concentrations and (3) the number present depends on the amount of prey available (numerical response). Over 3 yr, typically on a quarterly basis, in Frederick Sound, SE Alaska, multiple measurements were taken of Steller sea lion abundance (aerial surveys), diet (scats), dive behavior (satellite telemetry)and prey availability and caloric density (nearshore, pelagic and demersal fish surveys). We found that Steller sea lions shifted diet composition in response to changes in prey availability of pollock Theragra chalcogramma, hake Merluccius productus, herring Clupea pallasi and salmon Oncorhynchus spp. They selected intermediate-sized fish and avoided small (<10 cm) and large (>60 cm) fish, and moved between areas as prey became available seasonally. The number of sea lions present depended on the amount of prey available; a standing biomass of 500 to 1700 t of prey in a nonbreeding area such as Frederick Sound, depending on species composition, can attract and sustain about 500 sea lions. Pollock was more frequent in sea lion diet in inside waters of SE Alaska including Frederick Sound, Stephens Passage and Lynn Canal than anywhere else in Alaska and contributed about one-third of the dietary energy in Frederick Sound. This finding implies that a diet with substantial year-round contributions from less nutritious, but abundant prey such as pollock can form part of a healthy diet as long as more nutritious prey such as herring, salmon or eulachon Thaleichthys pacificus also are consumed. Our study supports the conclusion that the Steller sea lion is an opportunistic marine predator with a flexible foraging strategy that selects abundant, accessible prey and shifts among seasonally available species.
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Fasting affects the surface and diving metabolic rates of Steller sea lions (Eumetopias jubatus).
Svard, C., A. Fahlman, D.A.S. Rosen, R. Joy and A.W. and Trites. 2009.
Aquatic Biology 8:71-82.
abstract
Changes in metabolic rates were measured in 3 captive female Steller sea lions (Eumetopias jubatus) that experienced fasts during summer and winter. Metabolic rates were measured (via O2 consumption) before (MRs, surface) and after (DMR, dive + surface interval) the sea lions dove to 10–50 m depths. Measurements were obtained prior to 9-10 day fasts, and following a 14 day recovery period. The sea lions lost significantly more body mass (Mb) during the winter fast (10.6%), compared with the summer (9.5%). Mass-corrected dive metabolic rate (cDMR = DMR • Mb-0.714) was not affected by dive depth or duration, but increased significantly following the winter fasts (13.5 ± 8.1%), unlike the decrease during summer (-1.1 ± 3.2%). However, mass-corrected surface metabolic rate (cMRs) decreased significantly after both the summer (-16.4 ± 4.7%) and winter (-8.0 ± 9.0%) fasts. Consequently, the ratio between cDMR and cMRc was significantly higher in winter, suggestive of an increased thermal challenge and convective heat loss while diving. Increased cDMs following the fast indicated that digestion began during foraging and was not deferred, implying that access to ingested energy was of higher priority than optimizing diving ability. cDMR was elevated throughout the recovery period, independent of season, resulting in a 12% increase in foraging cost in winter and a 3% increase in summer. Our data suggest that Steller sea lions are more sensitive to changes in body condition due to food shortages in the winter compared with the summer.
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Development and application of DNA techniques for validating and improving pinniped diet estimates.
Tollit, D.J., A.D. Schulze, A.W. Trites, P.F. Olesiuk, S.J. Crockford, R.R. Ream T.S. Gelatt and K.M. Miller. 2009.
Ecological Applications 19:889-905.
abstract
Polymerase chain reaction techniques were developed and applied to identify DNA from >40 species of prey contained in fecal (scat) soft part matrix collected at terrestrial sites used by Steller sea lions (Eumetopias jubatus) in British Columbia and the Eastern Aleutian Islands, Alaska. Sixty percent more fish and cephalopod prey were identified by morphological analyses of hard parts compared with DNA analysis of soft parts (hard parts identified higher relative proportions of Ammodytes sp., Cottidae and certain Gadidae). DNA identified 213 prey occurrences of which 75 (35%) were undetected by hard parts (mainly Salmonidae, Pleuronectidae, Elasmobranchii and Cephalopoda), and thereby increased species occurrences by 22% overall and species richness in 44% of cases (when comparing 110 scats that amplified prey DNA). Prey composition was identical within only 20% of scats. Overall, diet composition derived from both identification techniques combined did not differ significantly from hard part identification alone, suggesting that past scat-based diet studies have not missed major dietary components. However, significant differences in relative diet contributions across scats (as identified using the two techniques separately) reflect passage rate differences between hard and soft digesta material and highlight certain hypothesized limitations in conventional morphological-based methods (e.g., differences in resistance to digestion, hard part regurgitation, partial and secondary prey consumption), as well as potential technical issues (e.g., resolution of primer efficiency and sensitivity, and scat subsampling protocols). DNA analysis of salmon occurrence (from scat soft part matrix and 238 archived salmon hard parts) provided species-level taxonomic resolution that could not be obtained by morphological identification, and showed that Steller sea lions were primarily consuming pink (Oncorhynchus gorbuscha) and chum (Oncorhynchus keta) salmon. Notably, DNA from Atlantic salmon (Salmo salar) that likely originated from a distant fish farm was also detected in two scats from one site in the Eastern Aleutian Islands. Overall, molecular techniques are valuable for identifying prey in the fecal remains of marine predators. Combining DNA and hard part identification will effectively alleviate certain predicted biases, and will ultimately enhance measures of diet richness, fisheries interactions (especially salmon related ones) and the ecological role of pinnipeds and other marine predators, to the benefit of marine wildlife conservationist and fisheries managers.
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Predator-prey relationships.
Trites, A.W. 2009.
In B. Wursig W.F. Perrin (ed.), Encyclopedia of Marine Mammals. Academic Press, San Diego. pp. 933-936.
abstract
Marine mammal predator – prey interactions occur over different spatial and temporal scales, making it difficult to empirically decipher the influences they have on one another and on their ecosystems. However, their coexistence suggests that marine mammal predators and their prey have had profound influences on each other’s behaviors, physiologies, morphologies, and life-history strategies. The diversity of niches filled by marine mammals makes it difficult to generalize about the evolutionary consequences of their interactions with prey, beyond stating the obvious: marine mammals have adapted to catch food, while their prey have adapted to avoid being caught. On the shorter ecological time scale, marine mammals can affect the abundance of other species by consuming or outcompeting them. They can also indirectly affect the abundance of nontargeted species by consuming one of their predators, and can have strong impacts on the overall dynamics and structure of their ecosystems. One of the best tools for understanding marine mammal predator – prey interactions is the ecosystem model. However, more work is required through experimental manipulations and observational studies to evaluate the choices made by marine mammals and the costs of obtaining different species of prey.
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2008
 
Economic valuation of critical habitat closures.
Berman, M., E.J. Gregr, G. Ishimura, R. Coatta, R. Flinn, U.R. Sumaila and A.W. Trites. 2008.
In Fisheries Centre Research Reports. Vol 16(8) pp. 102
abstract
We developed methods to estimate the spatial variation in economic values of ocean fisheries, and applied the methods to estimate the cost of closing groundfish fisheries in Steller sea lion Critical Habitat in the Bering Sea and Gulf of Alaska. The research addressed two related goals: (1) explicitly linking spatial variability of fisheries biomass and profitability over time to environmental variables; and (2) developing estimates of opportunity costs of time and area closures to the fishing industry at scales relevant to management. The approach involved two stages of statistical analyses. First, environmental conditions measured at 3 km and 9 km spatial scales and two-week and one-month intervals were used to predict fish biomass and fisheries catch per unit of effort (CPUE). Environmental variables included bathymetry, remotely sensed physical and biological observations, and output from a physical oceanographic circulation model. Second, we used predicted CPUE and spatial regulatory and cost factors to explain the spatial distribution of fishing effort over time. Our results suggested that 2001 Critical Habitat closures cost the North Pacific groundfish trawl fisheries 5-40 percent of their total potential net earnings. The improved methods for estimating opportunity costs of fisheries closures we present have direct applications to evaluating boundary changes to marine protected areas and other spatial management decisions. Limitations include the extensive data requirements and the need to bootstrap confidence intervals. If further research demonstrates the robustness and stability of the estimated relationships over time, the methods could project spatial fishery effects of climate variability and change, leading to dynamic spatial models linking fisheries with ecosystems.
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Metabolic costs of foraging and the management of O2 and CO2 stores in Steller sea lions.
Fahlman, A., Svärd, C., Rosen, D.A.S., Jones, D.R. and Trites, A.W. 2008.
Journal of Experimental Biology 211:3573-3580.
abstract
The metabolic costs of foraging and the management of O2 stores during breath-hold diving was investigated in three female Steller sea lions (Eumetopias jubatus) trained to dive between 10 and 50 m (n=1142 dives). Each trial consisted of 2 to 8 dives separated by surface intervals (SI) that were determined by the sea lion (spontaneous trials) or by the researcher (conditioned trials). During conditioned trials, SI was long enough for O2 to return to pre-dive levels between each dive. The metabolic cost of each dive event (DMR = dive + surface interval) was measured using flow-through respirometry. The respiratory exchange ratio (VCO2 ·VCO2 -1) was significantly lower during spontaneous trials compared with conditioned trials. DMR was significantly higher during spontaneous trials and decreased exponentially with dive duration. A similar decrease in DMR was not as evident during conditioned trials. DMR could not be accurately estimated from the SI following individual dives that had short surface intervals (SI < 50 sec), but could be estimated on a dive by dive basis for longer SIs (SI > 50 sec). DMR decreased by 15%, but did not differ significantly from surface metabolic rates (MRS) when dive duration increased from 1 to 7 min. Overall, these data suggest that DMR is almost the same as MRS, and that Steller sea lions incur an O2 debt during spontaneous diving that is not repaid until the end of the dive bout. This has important consequences in differentiating between the actual and ‘apparent’ metabolic rate during diving, and may explain some of the metabolic differences reported between pinniped species.
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Buoyancy does not affect diving metabolism during shallow dives in Steller sea lions Eumetopias jubatus.
Fahlman, A., G.D. Hastie, D.A.S. Rosen, Y. Naito and A.W. Trites. 2008.
Aquatic Biology 3:147-154.
abstract
hanges in buoyancy due to seasonal or abnormal changes in body composition are thought to significantly affect the energy budget of marine mammals through changes in diving costs. We assessed how changes in body composition might alter the foraging efficiency of Steller sea lions Eumetopias jubatus by artificially adjusting the buoyancy of trained individuals. PVC tubes were attached to harnesses worn by Steller sea lions that had been trained to feed at fixed depths (10 to 30 m) and to resurface inside a metabolic dome. Buoyancy was altered to simulate the naturally occurring differences in body composition reported in adult females (~12 to 26% subcutaneous fat). Diving characteristics (transit times and time at depth) and aerobic energy expenditure (gas exchange) were measured. We found that foraging cost decreased with the duration of the dive and increased with dive depth. However, changes in body composition did not affect the diving metabolic rate of Steller sea lions for dives between 10 and 30 m. We propose that Steller sea lions may adjust their diving lung volume to compensate for changes in buoyancy to avoid additional metabolic costs.
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Activity and diving metabolism correlate in Steller sea lion Eumetopias jubatus.
Fahlman, A., R. Wilson, C. Svärd, D.A.S. Rosen and A.W. Trites. 2008.
Aquatic Biology 2:75-84.
abstract
Three Steller sea lions Eumetopias jubatus were trained to participate in free-swimming, open-ocean experiments designed to determine if activity can be used to estimate the energetic cost of finding prey at depth. Sea lions were trained to dive to fixed depths of 10 to 50 m, and to re-surface inside a floating dome to measure energy expenditure via gas exchange. A 3-axis accelerometer was attached to the sea lions during foraging. Acceleration data were used to determine the overall dynamic body acceleration (ODBA), a proxy for activity. Results showed that ODBA correlated well with the diving metabolic rate (dive + surface interval) and that the variability in the relationship (r2 = 0.47, linear regression including Sea lion as a random factor) was similar to that reported for other studies that used heart rate to estimate metabolic rate for sea lions swimming underwater in a 2 m deep water channel. A multivariate analysis suggested that both ODBA and dive duration were important for predicting diving metabolic cost, but ODBA alone predicted foraging cost to within 7% between animals. Consequently,collecting 3-dimensional acceleration data is a simple technique to estimate field metabolic rate of wild Steller sea lions and other diving mammals and birds.
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A novel presence-only validation technique for improved Steller sea lion Eumetopias jubatus critical habitat descriptions.
Gregr, E.J. and A.W. Trites. 2008.
Marine Ecology Progress Series 365:247-261.
abstract
We used published information about foraging behaviour, terrestrial resting sites, bathymetry, and seasonal ocean climate to develop hypotheses relating life history traits and physical variables to the at-sea habitat of a wide-ranging marine predator, the Steller sea lion (Eumetopias jubatus). We used the hypotheses to develop a series of habitat models that predicted the probability of sea lions occurring within 3 x 3 km2 grids overlaid on the Gulf of Alaska and Bering Sea; and compared these deductive model predictions with opportunistic at-sea observations of sea lions (presence-only data) using 1) a likelihood approach in a small area where effort was assumed to be uniformly distributed, and 2) an adjusted skewness (Skadj) test that evaluated the distribution of the predicted values associated with true presence observations. We found the Skadj statistic was comparable to the likelihood test when using pseudo-absence data, but it was more powerful for assessing the relative performance of the different predictive spatial models. We also found that the habitat maps we produced for adult female sea lions using the deductive modelling approach captured a higher proportion of presence observations than the current habitat model (Critical Habitat) used by fisheries managers since 1993 to manage Steller sea lions. Such improved predictions of habitat are necessary to effectively design, implement, and evaluate fishery mitigation measures. The deductive approach we propose is suitable for modelling the habitat use of other age- and sex- classes, and for integrating these age/sex class specific models into a revised definition of Critical Habitat for Steller sea lions. It can also be readily used to identify the at-sea habitat of other central place foragers.
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Steller sea lions show diet-dependent changes in body composition during nutritional stress and recover more easily from mass loss in winter than in summer.
Jeanniard du Dot, T., Rosen, D. A. S. , Trites, A. W. 2008.
Journal of Experimental Marine Biology and Ecology 367(1):1-10.
abstract
Controlled feeding experiments were undertaken with captive Steller sea lions (Eumetopias jubatus) to assess seasonal (winter vs. summer) physiological responses of individual animals to reduced quantities and qualities of food that are hypothesised to occur in the wild. Eight animals were randomly divided into two experimental groups fed isocaloric diets: Group H ate Pacific herring (Clupea pallasi) throughout the experiment while Group P was switched to walleye pollock (Theragra chalcogramma) during a 28-day food restriction (after a 28-day baseline) and back to herring during a 28-day controlled re-feeding. Diet type did not impact the rates of body mass lost when food was restricted, but did influence the type of internal energy reserve (protein vs lipids) the sea lions predominantly used. In both summer and winter, Group H lost significantly more lipids and less lean mass than Group P that was fed pollock during the restriction phase. The response of Group H was consistent with the predicted pattern of nutritional stress physiology (i.e. protein sparing and utilization of lipid reserves). Group P lost a surprisingly high proportion of body protein while consuming restricted levels of pollock, which could lead to muscle impairment and vital organ failure on a long-term basis. When given increased amounts of herring during the controlled re-feeding phase, the capacity of both groups to compensate for the previous mass loss was found to depend on season and was independent of previous diet. All of the sea lions increased their rates of mass gain and returned to their pre-experimental weight during winter, but not during summer. Some intrinsic energetic plasticity related to seasonal adaptation to the environment may render winter an easier period than summer to recover from nutritional stress.
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A 4500-year time series of Pacific cod (Gadus macrocephalus) size and abundance: archaeology, regime shifts, and sustainable fisheries.
Maschner, H. D. G., M. W. Betts, K. L. Reedy-Maschner and A. W. Trites. 2008.
Fishery Bulletin 106:386-394.
abstract
4500-year archaeological record of Pacific cod (Gadus macrocephalus) bones from Sanak Island, Alaska, was used to assess the sustainability of the modern fishery and the effects of this fishery on the size of fish caught. Allometric reconstructions of cod length for eight prehistoric time periods indicated that the current size of the near shore, commercially fished cod stocks is statistically unchanged from that of fish caught during 4500 years of subsistence harvesting. This finding indicates that the current Pacific cod fishery that uses selective harvesting technologies is a sustainable commercial fishery. Variation in relative cod abundances provides further insights into the response to punctuated changes in ocean climate (regime shifts) and suggests that Pacific cod stocks can recover from major environmental perturbations. Such palaeofisheries data can extend the short time-series of fisheries data (<50 y) that form the basis for fisheries management in the Gulf of Alaska and place current trends within the context of centennial- or millennial-scale patterns.
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Marine Mammals in the Lab: Tools for Conservation and Science.
Rosen, D.A.S. and A.W. Trites. 2008.
In North Pacific Universities Marine Mammal Research Consortium. Vancouver, BC. pp. 15 pages
abstract
Twenty-two participants from a variety of backgrounds and interests discussed how to improve the nature of research with marine mammals in the laboratory and ensure its continuation as a vital scientific resource in the future. There was agreement that captive marine mammals represent a valuable scientific asset. Many of the pressing conservation and scientific research questions pertaining to marine mammals cannot be carried out with their wild counterparts. However, studying marine mammals in the laboratory incurs specific financial, scientific, and logistical challenges. The workshop generated potential solutions to many of these issues. Participants expressed the need for greater cooperation and coordination between scientists to optimize the scientific value of research with captive marine mammals, and to minimize the costs of such research. This could be enhanced through scheduled in-person gatherings and web-based portals for listing active and proposed research. Better use must also be made of scientific resources and expertise, and novel sources of revenue have to be generated. There should also be greater sharing of documents relating to experimental design and research permitting. The effectiveness of research will benefit from greater communication between researchers and husbandry staff at institutions holding animals for research. Such efforts should raise the profile (and acceptance) of captive marine mammals science within the scientific community and for program administrators, leading to greater financial and research opportunities. Nine specific recommendations were forwarded that could be immediately implemented to enhance communication and increase the value of captive marine mammal science: 1. Produce a list of research resources (animals, specialized skills and equipment); 2. Create a list of on-going captive marine mammal studies; 3. Produce a list of publications derived from research with captive marine mammals; 4. Develop a set of guidelines for communication, responsibilities, and intellectual ownership for collaborative projects; 5. Implement means for coordination of future studies (both web-based and scheduled workshop/meetings); 6. Design a means for sharing standard Operating Procedures; 7. Hold a workshop to increase statistical rigor and standards in experimental design; 8. Introduce the use of annual survival rates into institutions holding marine mammals; and 9. Heighten the awareness of the value and prevalence of captive studies to the Us Marine Mammal Commission.
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Diets of mature male and female Steller sea lions differ and cannot be used as proxies for each other.
Trites, A.W., and D.G. Calkins. 2008.
Aquatic Mammals 34:25-34.
abstract
Disturbance of otariid breeding sites (rookeries) to determine diet from fecal remains (scats) could be eliminated if the diets of males using adjoining bachelor haulouts could be used as a proxy for diets of breeding females. We collected scats from sexually mature Steller sea lions (Eumetopias jubatus) at one male resting site (haulout) and three female dominated breeding sites (rookeries) at Forrester Island, Southeast Alaska (June-July, 1994–1999) to test whether the diets of bachelor bulls differed from that of breeding females. Female diets were fairly evenly distributed between gadids, salmon and small oily fishes (forage fish), and contained lesser amounts of rockfish, flatfish, cephalopods and other fishes. Female diet did not differ significantly between the 3 rookeries, but did differ significantly from that of males. Males consumed significantly fewer salmon, and more pollock, flatfish and rockfish compared to females. The males also consumed larger pollock compared to females. These dietary differences may reflect a sex-specific difference in foraging areas or differences in hunting abilities related to the disparity in physical sizes of males and females. The similarity of the female diets between rookeries suggests that female diets can be determined from samples collected at a single site within a rookery complex. Unfortunately, summer diets of breeding females cannot be ascertained from hard parts contained in the scats of mature male Steller sea lions.
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2007
 
Quantification of terrestrial haul-out and rookery characteristics of Steller sea lions.
Ban, S. and A.W. Trites. 2007.
Marine Mammal Science 23:496-507.
abstract
Steller sea lions (Eumetopias jubatus)are known to have occupied the same terrestrial haul-out and rookery sites across the North Pacific rim for centuries, but it is not known why they choose and stay at these locations, or what defines their preferred habitat. Classifying and comparing the shoreline type of haulouts and rookeries against sites not used by Steller sea lions showed that they preferentially locate their haulouts and rookeries on exposed rocky shorelines and wave-cut platforms. However, no preference was found for selecting rookeries on sheltered shore-types. Shoreline types used less frequently by sea lions included fine-to-medium-grained sand beaches, mixed sand and gravel beaches, gravel beaches, and sheltered rocky shores. Quantifying the shoreline types used by sea lions confirms anecdotal reports of habitat preferences and may prove useful in identifying and protecting sea lion terrestrial habitat, or in forecasting how climate change might affect the distribution of sea lions.
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Turning maneuvers in Steller sea lions (Eumatopias jubatus).
Cheneval, O., R. W. Blake, A. W. Trites and K. H. S. Chan. 2007.
Marine Mammal Science 23:94-109.
abstract
Steller sea lions are highly maneuverable marine mammals (expressed as minimum turning radius). Video recordings of turns (n=195) are analyzed from kinematic measurements for three captive animals. Speed-time plots of 180° turns have a typical ?V-shape?. The sea lions decelerated during the first half of the turn, reached a minimum speed in the middle of the curved trajectory and re-accelerated by adduction of the pectoral flippers. The initial deceleration was greater than that for passive gliding due to pectoral flipper braking and/or change in body contour from a stiff, straight streamlined form. Centripetal force and thrust were determined from the body acceleration. Most thrust was produced during the power phase of the pectoral flipper stroke cycle. Contrary to previous findings on otariids, little or no thrust was generated during initial abduction of the pectoral flippers and during the final drag-based paddling phase of the stroke cycle. Peak thrust force! at the center of gravity occurs halfway through the power phase while the centripetal force is maximal at the beginning of the power stroke. Performance is modulated by changes in the duration and intensity of movements without changing their sequence. Turning radius, maximum velocity, maximum acceleration and turning duration were 0.3 body lengths, 3.5 m/s, 5 m/s2 and 1.6 s respectively. The relative maneuverability based on velocity and length specific minimum turning radius is comparable to other otariids, superior to cetaceans but inferior to many fish.
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Population trends, diet, genetics, and observations of Steller sea lions in Glacier Bay National Park.
Gelatt, T., A.W.Trites, K. Hastings, L. Jemison, K. Pitcher, and G. O’Corry-Crowe. 2007.
In J.F. Piatt and S.M. Gende (eds), Proceedings of the Fourth Glacier Bay Science Symposium, U.S. Geological Survey, Juneau , Alaska. pp. 145-149.
abstract
We are using demographics, scat analysis, and genetic measurements of Steller sea lions (SSLs)to understand the factors affecting population status throughout Alaska. Steller sea lions are listed as threatened throughout Southeast Alaska including Glacier Bay National Park where they frequent at least five terrestrial sites, including a recently established rookery on Graves Rock. Breeding season counts in GBNP increased at ~6 percent/yr between 1989 and 2002. Brand resighting during 2003 revealed 16 western stock SSLs seen within the park. Survival to two months of age was 90 percent. Fifty pups were branded at Graves Rock in 2002. It is necessary to mark more animals to estimate annual survival rates of juveniles and adults. Sandlance and pollock were top prey items at Graves Rock and South Marble Island. Mitochondrial DNA analysis indicates that the Graves Rock rookery was established in part by females from the western sea lion stock (west of 144° W longitude).
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Ecosystem models of the Aleutian Islands and Southeast Alaska show that Steller sea lions are impacted by killer whale predation when sea lion numbers are low.
Guenette S., S.J.J. Heymans, V. Christensen, A.W. Trites. 2007.
In J.F. Piatt and S.M. Gende (eds), Proceedings of the Fourth Glacier Bay Science Symposium, U.S. Geological Survey, Juneau , Alaska. pp. 150-154.
abstract
We constructed ecosystem models using the Ecopath with Ecosim software to evaluate whether predation by killer whales might explain the decline of Steller sea lions since the late 1970s in the western Aleutian Islands. We also sought to understand why sea lions increased in the presence of killer whales in Southeast Alaska. Modeling results reproduced the time series of abundances for exploited species and sea lions in both ecosystems. Simulation results suggest that killer whale predation contributed to the decline of sea lions in the western Aleutians, but that predation was not the primary cause of the population decline. Predation could however have become a significant source of mortality during the 1990s when sea lions numbers were much lower. In Southeast Alaska, predation was also found to be a significant source of mortality in the 1960s when sea lions were low, but ceased to control population growth through the 1980s and 1990s. Overall, the ecosystem models suggest that large populations of Steller sea lions can withstand predation, but that small populations are vulnerable to killer whales.
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Reductions in oxygen consumption during dives and estimated submergence limitations of Steller sea lions (Eumetopias jubatus).
Hastie, G.D., D.A.S. Rosen and A.W. Trites. 2007.
Marine Mammal Science 23:272-286.
abstract
Accurate estimates of diving metabolic rate are central to assessing the energy needs of marine mammals. To circumvent some of the limitations inherent with conducting energy studies in both the wild and captivity, we measured diving oxygen consumption of two trained Steller sea lions (Eumetopias jubatus) in the open ocean. The animals dived to predetermined depths (5–30 m) for controlled periods of time (50–200 s). Rates of oxygen consumption were measured using open-circuit respirometry before and after each dive. Mean resting rates of oxygen consumption prior to the dives were 1.34 (±0.18) and 1.95 (±0.19) liter/min for individual sea lions. Mean rates of oxygen consumption during the dives were 0.71 (±0.24) and 1.10 (±0.39) liter/min, respectively. Overall, rates of oxygen consumption during dives were significantly lower (45% and 41%) than the corresponding rates measured before dives. These results provide the first estimates of diving oxygen consumption rate for Steller sea lions and show that this species can exhibit a marked decrease in oxygen consumption relative to surface rates while submerged. This has important consequences in the evaluation of physiological limitations associated with diving such as dive duration and subsequent interpretations of diving behavior in the wild.
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Comparison of fatty acid profiles of spawning and non-spawning Pacific herring, Clupea harengus pallasi.
Huynh, M.D., D.D. Kitts, C. Hu and A.W. Trites. 2007.
Journal of Comparative Biochemistry and Physiology, Part B 146:504-511.
abstract
Crude lipid and fatty acid composition from liver, intestine, roe, milt and flesh of spawning and non-spawning Pacific herring Clupea harengus pallasi were examined to determine the relative effects of spawning on the nutritional value of herring. Depletion of lipid due to spawning condition was significant (Pb0.01) in all organ tissues and flesh of spawning herring. The lipid content ranged from an average of 1.9 to 3.4% (wet weight basis) in different organ tissues of spawning herring, to 10.5 to 16% in non-spawning fish. The fatty acid profile exhibited many differences in the relative distribution of individual fatty acids among organ tissues and between the two fish groups. Oleic acid (C18:1n-9), a major monounsaturated fatty acid (MUFA) found in all tissue lipids, decreased significantly (Pb0.01) in spawning fish. The two monoenes, C20:1n-9 and C22:1n-11, occurred at high concentrations in the flesh but at only minor proportion in the digestive organs and gonads. Spawning herring also had significantly (Pb0.01) higher polyunsaturated fatty acids (PUFA) content in the organ tissues, particularly in the milt and ovary, with docosahexaenoic acid (C22:6n-3, DHA) having the greatest proportion. Among the n-6 fatty acids, only C18:2n-6 and C20:4n-6 occurred at notable amounts and were present in higher proportions in spawning fish. We concluded that although relatively higher n-3 fatty acid content was found in the organ lipids of spawning herring, they are not an energy-dense prey food source due to the fact that both flesh and gonads contain a very low amount of lipid.
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Link analysis of a prototype wireless implanted tracking tag.
Lea, A., R. Vaughan, W.G. Dunford, R.J. Petrell and A.W and Trites. 2007.
In 20th Canadian Conference on Electrical and Computer Engineering. pp. 920-923.
abstract
A team of researchers from Simon Fraser University and the University of British Columbia have designed and built a prototype implanted wireless tag for monitoring Steller sea lions. This paper reviews the system level RF design aspects, and estimates the RF link range.
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Ecotypic variation and predatory behavior among killer whales (Orcinus orca) off the eastern Aleutian Islands, Alaska.
Matkin, C., L.G. Barrett-Lennard, H.Yurk, D. Ellifrit, and A.W. Trites. 2007.
Fishery Bulletin 105:74-87.
abstract
From 2001 to 2004 in the eastern Aleutian Islands, Alaska, killer whales (Orcinus orca) were encountered 250 times during 421 days of surveys that covered a total of 22,491 miles. Three killer whale lineages (resident, transient, and offshore) were identified acoustically and genetically. Resident killer whales were found 12 times more frequently than transient killer whales, while offshore killer whales were only encountered once. A minimum of 901 photographically-identified resident whales used the region during our study. A total of 165 mammal-eating transient killer whales were identified, with the majority (70%) encountered during spring (May and June). The diet of transient killer whales in spring was primarily gray whales (Eschrichtius robustus), while northern fur seals (Callorhinus ursinus) were primary prey in summer. Steller sea lions (Eumetopias jubatus) did not appear to be a preferred prey or major prey item during spring and summer. The majority of killer whales in the eastern Aleutian Islands are the resident ecotype, which do not consume marine mammals.
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Utilization of stored energy reserves during fasting varies by age and season in Steller sea lions.
Rea, L.D., D.A.S. Rosen and A.W Trites. 2007.
Canadian Journal of Zoology 85:190-200.
abstract
Nine captive Steller sea lions (Eumetopias jubatus (Schreber, 1776), 1.75–6 years of age) were fasted for 7–14 d to test the effect of short-term fasting on changes in body mass and body condition. Trials were repeated during both the summer breeding season and the nonbreeding season in seven animals to elucidate whether there was a seasonal component to the ability of Steller sea lions to adapt to limited food resources. Mean percent mass loss per day was higher during the breeding season in juveniles (1.8% ± 0.2%·d–1) than in subadults (1.2% ± 0.1%·d–1), but there were no significant age-related differences during the nonbreeding season (juveniles, 1.5% ± 0.3%·d–1; subadults, 1.7% ± 0.3%·d–1). A decrease in the rate of mass loss occurred after the first 3 d of fasting only in subadults during the breeding season. Percent total body lipid ranged from 11% to 28% of total body mass at the initiation of fasting trials. Animals with lower initial percent total body lipid exhibited higher subsequent rates of mass loss and a lower percentage of tissue catabolism derived from lipid reserves. There was no evidence of metabolic adaptation to fasting in juveniles, which suggests that juvenile sea lions would be more negatively impacted by food limitation during the breeding season than would subadults.
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Laboratory studies in wildlife conservation: The case of the Steller sea lion.
Rosen, D.A.S., A.L. Fahlman, A.W. Trites and G.D. Hastie. 2007.
Comparative Biochemistry and Physiology A Vol 146 pp. S84
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Impact of diet index selection and the digestion of prey hard remains on determining the diet of the Steller sea lion (Eumetopias jubatus).
Tollit, D.J., S.G. Heaslip, R.L. Barrick and A.W. Trites. 2007.
Canadian Journal of Zoology 85:1-15.
abstract
Abstract: Nine prey species (n = 7,431) were fed to four captive female Steller sea lions (Eumetopias jubatus (Schreber, 1776)) in eleven feeding trials over 75 days to investigate the effectiveness of different methods used to determine diet from prey hard remains. Trials aimed to replicate short (1-2 day) and long feeding bouts and consisted of single species and mixed daily diets. Overall, an average of 25.2% ± 22.2% (mean ± SD, range 0-83%) of otoliths were recovered, but recovery rates varied by species (ANOVA, P = 0.01) and were linearly related to otolith robustness (R2 = 0.88). Squid beaks were recovered at higher frequencies (mean = 96%) than the otoliths of all species. Enumerating both non-otolith skeletal structures and otoliths (together termed ?bones?) increased species recovery rates by twofold on average (P < 0.001), with increases up to 2.5 times for herring and 3-4 times for salmonids. Using bones reduced inter-specific differences (P = 0.08), but recovery ! varied among sea lions. Bones were distributed over more scats per meal (mean = 2.9 scats, range = 0-5) than otoliths (mean = 1.9 scats, range = 0-4). In three different 15-day mixed diet trials, biomass reconstruction (BR) indices performed better than frequency of occurrence indices in predicting diet fed. Applying our experimentally derived numerical correction factors (to account for species differences in complete prey digestion) further improved BR estimates, resulting in all twelve unweighted comparisons within 5% (for otoliths) and 12% (for bones) of the actual diet fed.
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Bottom-up forcing and the decline of Steller sea lions (Eumetopias jubatus) in Alaska: assessing the ocean climate hypothesis.
Trites, A. W., A. J. Miller, H. D. G. Maschner, M. A. Alexander, S. J. Bograd, J. A. Calder, A. Capotondi, K. O. Coyle, E. D. Lorenzo, B. P. Finney, E. J. Gregr, C. E. Grosch, S. R. Hare, G. L. Hunt, J. Jahncke, N. B. Kachel, H.-J. Kim, C. Ladd, N. J. Mantua, C. Marzban, W. Maslowski, R. Mendelssohn, D. J. Neilson, S. R. Okkonen, J. E. Overland, K. L. Reedy-Maschner, T. C. Royer, F. B. Schwing, J. X. L. Wang and A. J. Winship. 2007.
Fisheries Oceanography 16:46-67.
abstract
Declines of Steller sea lion (Eumetopias jubatus) populations in the Aleutian Islands and Gulf of Alaska could be a consequence of physical oceanographic changes associated with the 1976-77 climate regime shift. Changes in ocean climate are hypothesized to have affected the quantity, quality and accessibility of prey, which in turn may have affected the rates of birth and death of sea lions. Recent studies of the spatial and temporal variations in the ocean climate system of the North Pacific support this hypothesis. Ocean climate changes appear to have created adaptive opportunities for various species that are preyed upon by Steller sea lions at mid-trophic levels. The east-west asymmetry of the oceanic response to climate forcing after 1976-77 is consistent with both the temporal aspect (populations decreased after the late 1970's) and the spatial aspect of the decline (western, but not eastern, sea lion populations decreased). These broad-scale climate variations appear to be modulated by regionally sensitive biogeographic structures along the Aleutian Islands and Gulf of Alaska, which include a transition point from coastal to open-ocean conditions at Samalga Pass westward along the Aleutian Islands. These transition points delineate distinct clusterings of different combinations of prey species, which are in turn correlated with differential population sizes and trajectories of Steller sea lions. Archaeological records spanning 4000 years further indicate that sea lion populations have experienced major shifts in abundance in the past. Shifts in ocean climate are the most parsimonious underlying explanation for the broad suite of ecosystem changes that have been observed in the North Pacific Ocean in recent decades.
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Killer whales, whaling and sequential megafaunal collapse in the North Pacific: a comparative analysis of the dynamics of marine mammals in Alaska and British Columbia following commercial whaling.
Trites, A. W., V. B. Deecke, E. J. Gregr, J. K. B. Ford, and P. F. Olesiuk. 2007.
Marine Mammal Science 23:751-765.
abstract
The hypothesis that commercial whaling caused a sequential megafaunal collapse in the North Pacific Ocean by forcing killer whales to eat progressively smaller species of marine mammals is not supported by what is known about the biology of large whales, the ecology of killer whales and the patterns of ecosystem change that took place in Alaska, British Columbia, and elsewhere in the world following whaling. A comparative analysis shows that populations of seals, sea lions and sea otters increased in British Columbia following commercial whaling, unlike the declines noted in the Gulf of Alaska and Aleutian Islands. The declines of seals and sea lions that began in western Alaska around 1977 were mirrored by increases in numbers of these species in British Columbia. A more likely explanation is the seal and sea lion declines and other ecosystem changes in Alaska stems from a major oceanic regime shift that occurred in 1977. Killer whales are unquestionably a significant predator of seals, sea lions and sea otters but not because of commercial whaling.
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Diets of Steller sea lions (Eumetopias jubatus) in Southeast Alaska from 1993-1999.
Trites, A.W., D.G Calkins and A.J. Winship. 2007.
Fishery Bulletin 105:234-248.
abstract
Diet of Steller sea lions (Eumetopias jubatus) was determined from 1494 scats (feces) collected at breeding (rookeries) and non-breeding (haulout) sites in Southeast Alaska from 1993 to 1999. The most common prey of 61 species identified were walleye pollock (Theragra chalcogramma), Pacific herring (Clupea pallasii), Pacific sand lance (Ammodytes hexapterus), Pacific salmon (Salmonidae), arrowtooth flounder (Atheresthes stomias), rockfish (Sebastes spp.), skates (Rajidae), and cephalopods (squid and octopus). Sea lion diets at the three Southeast Alaska rookeries differed significantly from one another. Steller sea lions consumed the most diverse range of prey categories during summer, and the least diverse during fall. Diet was more diverse in Southeast Alaska during the 1990s than in any other region of Alaska (Gulf of Alaska and Aleutian Islands). Dietary differences between increasing and declining populations of sea lions in Alaska correlate with rates of population change, and add credence to the view that diet may have played a role in the decline of sea lions in the Gulf of Alaska and Aleutian Islands.
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2006
 
Relationship between Steller sea lion diets and fish distributions in the eastern North Pacific.
Bredesen, E.L., A.P. Coombs, and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 131-139.
abstract
Distributions of fish species were compared with diet information for Steller sea lions (Eumetopias jubatus) to assess the level of correspondence between potential prey availability and sea lion feeding habits. Fish distributions were compiled as part of the Sea Around Us Project at the UBC Fisheries Centre, and were based on published distributions and habitat preferences (e.g., latitude, depth). Sea lion scat samples were collected during the 1990s from seven geographic regions from Oregon to the western and central Aleutian Islands. The frequencies of occurrence of four prevalent species (walleye pollock, Theragra chalcogramma ; Pacific herring, Clupea pallasii ; Pacific cod, Gadus macrocephalus ; and North Pacific hake, Merluccius productus ) in the Steller sea lion diet were compared to their distributions in the North Pacific Ocean. The data suggest that Steller sea lion diets broadly reflect the distributions of these major prey species. However, some of the fish species that were regionally predicted to be present in high abundance were not proportionally reflected in the Steller sea lion diet, suggesting that other factors in addition to fish abundance influence their diets.
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The Sequential Megafaunal Collapse Hypothesis: Testing with Existing Data.
DeMaster, D.P., A.W. Trites, P. Clapham, S. Mizroch, P. Wade, R.J. Small, and J. Ver Hoef. 2006.
Progress in Oceanography 68:329-342.
abstract
Springer et al. [Springer, A.M., Estes, J.A., van Vliet, G.B., Williams, T.M., Doak, D.F., Danner, E.M., Forney, K.A., Pfister, B., 2003. Sequential megafaunal collapse in the North Pacific Ocean: an ongoing legacy of industrial whaling? Proceedings of the National Academy of Sciences 100 (21), 12,223–12,228] hypothesized that great whales were an important prey resource for killer whales, and that the removal of fin and sperm whales by commercial whaling in the region of the Bering Sea/Aleutian Islands (BSAI) in the late 1960s and 1970s led to cascading trophic interactions that caused the sequential decline of populations of harbor seal, northern fur seal, Steller sea lion and northern sea otter. This hypothesis, referred to as the Sequential Megafaunal Collapse (SMC), has stirred considerable interest because of its implication for ecosystem-based management. The SMC has the following assumptions: (1) fin whales and sperm whales were important as prey species in the Bering Sea; (2) the biomass of all large whale species (i.e., North Pacific right, fin, humpback, gray, sperm, minke and bowhead whales) was in decline in the Bering Sea in the 1960s and early 1970s; and (3) pinniped declines in the 1970s and 1980s were sequential. We concluded that the available data are not consistent with the first two assumptions of the SMC. Statistical tests of the timing of the declines do not support the assumption that pinniped declines were sequential. We propose two alternative hypotheses for the declines that are more consistent with the available data. While it is plausible, from energetic arguments, for predation by killer whales to have been an important factor in the declines of one or more of the three populations of pinnipeds and the sea otter population in the BSAI region over the last 30 years, we hypothesize that the declines in pinniped populations in the BSAI can best be understood by invoking a multiple factor hypothesis that includes both bottom–up forcing (as indicated by evidence of nutritional stress in the western Steller sea lion population) and top–down forcing (e.g., predation by killer whales, mortality incidental to commercial fishing, directed harvests). Our second hypothesis is a modification of the top–down forcing mechanism (i.e., killer whale predation on one or more of the pinniped populations and the sea otter population is mediated via the recovery of the eastern North Pacific population of the gray whale). We remain skeptical about the proposed link between commercial whaling on fin and sperm whales, which ended in the mid-1960s, and the observed decline of populations of northern fur seal, harbor seal, and Steller sea lion some 15 years later.
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Ecosystem models show combined effects of fishing, predation, competition, and ocean productivity on Steller sea lions (Eumetopias jubatus) in Alaska.
Guénette, S., S.J.J. Heymans, V. Christensen, and A.W. Trites. 2006.
Canadian Journal of Fisheries and Aquatic Sciences 63:2495-2517.
abstract
Steller sea lions (Eumetopias jubatus) increased in the eastern portion of their range while declining in the Gulf of Alaska and Aleutian Islands from the late 1970s to late 1990s. We constructed ecosystem models of the central and western Aleutians and of Southeast Alaska to simultaneously evaluate four hypotheses explaining sea lion dynamics: killer whale (Orcinus orca) predation, ocean productivity, fisheries, and competition with other species. Comparisons of model predictions to historical time series data indicate that all four factors likely contributed to the trends observed in sea lion numbers in both ecosystems. Changes in ocean productivity conveyed by the Pacific Decadal Oscillation influenced the abundance trajectory of several species. Fishing could have affected the ecosystem structure by influencing the abundance of Atka mackerel (Pleurogrammus monopterygius) in the Aleutians, and herring (Clupea pallasii) in Southeast Alaska. Halibut (Hypoglossus stenolepis) in the Aleutians and arrowtooth flounder (Reinhardtius stomias) in Southeast Alaska appear to impede sea lion population growth through competitive interactions. Predation by killer whales was important when sea lions were less abundant in the 1990s in the Aleutians and in the 1960s in Southeast Alaska, but appear to have little effect when sea lion numbers were high.
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Studying trained Steller sea lions in the open ocean.
Hastie, G, D.A.S. Rosen, and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 193-204.
abstract
The costs associated with diving are a central component of a sea lions? energy budget. Accurate estimates of diving costs are needed to assess energetic and physiological constraints on foraging behavior, including the potential effects of changes in prey distribution or density. However, information on sea lion diving physiology is limited to relatively few species of pinnipeds, and there is currently no information for Steller sea lions. Information on diving energetics of pinnipeds has traditionally been gathered using either wild or captive animals. However, studies with wild animals are logistically challenging and are limited by the opportunistic nature of data collection, whilst studies in captivity have been constrained by the physical restrictions of the holding facility. To circumvent some of these limitations, we combined the best aspects of both techniques by conducting diving metabolism studies with trained Steller sea lions in an open ocean environment. Two captive-reared Steller sea lions were housed in a holding pen and transported by boat to a diving trial area. The animals were trained to dive to predetermined depths for controlled periods of time using an underwater light targeting system and a video system to monitor behavior. At the end of each dive the sea lions returned to a respirometry dome on the surface where oxygen consumption was measured to estimate diving metabolism. This paper describes the experimental setup used to evaluate diving metabolism, discusses the logistical challenges of the study and the advantages of using such an approach to carry out physiological experiments with sea lions, and provides preliminary data on the diving energetics of Steller sea lions.
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The influence of depth on a breath-hold diver: predicting the diving metabolism of Steller sea lions (Eumetopias jubatus).
Hastie, G.D, D.A.S. Rosen, A.W. Trites. 2006.
Journal of Experimental Marine Biology and Ecology 336:163-170.
abstract
Diving animals must endeavor to increase their dive depths and prolong the time they spend exploiting resources at depth. Results from captive and wild studies suggest that many diving animals extend their foraging bouts by decreasing their metabolisms while submerged. We measured metabolic rates of Steller sea lions (Eumetopias jubatus) trained to dive to depth in the open ocean to investigate the relationships between diving behaviour and the energetic costs of diving. We also constructed a general linear model to predict the oxygen consumption of sea lions diving in the wild. The resultant model suggests that mean swimming distance and depth of dives significantly influence the oxygen consumption of diving Steller sea lions. The predictive power of the model was tested using a cross-validation approach, whereby models reconstructed using data from pairs of sea lions were found to accurately predict the oxygen consumption of the third diving animal. Predict! ed oxygen consumption during dives to depth ranged from 3.37 L min-1 at 10 meters, to 1.40 L min-1 at 300 meters over a standardized swimming distance of 600 meters. This equated to an estimated metabolic rate of 97.54 and 40.52 MJ day-1, and an estimated daily feeding requirement of 18.92 and 7.96 kg day-1 for dives between 10 and 300 meters, respectively. The model thereby provides information on the potential energetic consequences that alterations in foraging strategies due to changes in prey availability could have on wild populations of sea lions.
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Using simulations to evaluate reconstructions of sea lion diet from scat.
Joy, R., D.J. Tollit, J.L. Laake, and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 205-222.
abstract
Models used to describe pinniped diet can provide very different composition estimates. Occurrence indices as well as biomass reconstruction models (which use estimates of the number and sizes of prey consumed) are commonly used and increasingly utilize a variety of fish hard remains (bones) found in scats. However, the importance of any single fish can be overestimated if its bones are deposited in a succession of scats assumed to be from different fish. Similarly, the importance of a species will be underestimated relative to other species if the bones of one species are more fragile and are completely digested or if bones from different fish of the same species are contained in a single scat and assumed to be from a single fish. Species differences in the proportion of fish bones that survive digestion can be assessed from captive feeding studies where the number and species of prey consumed is known. Numerical correction factors can be calculated to take into account the levels of complete digestion. We performed computer simulations using data from captive feeding studies to investigate levels and sources of error in reconstructing simulated mixed species diets. Our simulations used different combinations of hard remains, were conducted both with and without the application of numerical correction factors, and compared four different diet indices (1. Modified frequency of occurrence, 2. Split sample frequency of occurrence, 3. Variable biomass reconstruction, 4. Fixed biomass reconstruction). Simulations indicated that levels of error were related to the MNI method of inferring fish numbers from prey remains, prey size, the number of identifiable prey structures used, and the robustness of the remains to digestive processes (recovery rate). The fewer fish fed, the higher the relative probability of counting the fish, particularly when a multiple element structure or all structure techniques are used. If recovery rates were assumed to be consistent across species, then large fish (particularly when fed in small amounts) were overestimated relative to smaller sized prey in all models, but particularly biomass reconstruction models and when using more than one paired structure. When recovery rates of a paired structure (otoliths) were varied across species (as observed in captive feeding studies) then biomass models tended to overestimate the species with high recovery rates. In contrast, frequency of occurrence models overestimated the contribution of smaller prey (particularly when fed in small amounts). Simulations also indicated correction factors can reduce levels of error in biomass reconstruction models, but cannot solve problems related to counting fish using MNI. Our work shows simulations can form a valuable component in assessing diet indices and the level (and direction) of associated errors in each.
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Mapping world-wide distributions of marine mammal species using a relative environmental suitability (RES) model.
Kaschner, K., R. Watson, A. W. Trites and D. Pauly. 2006.
Marine Ecology Progress Series 316:285-310.
abstract
The lack of comprehensive sighting data sets precludes the application of standard habitat suitability modeling approaches to predict distributions of the majority of marine mammal species on very large scales. As an alternative, we developed an ecological niche model to map global distributions of 115 cetacean and pinniped species living in the marine environment using more readily available expert knowledge about habitat usage. We started by assigning each species to broad-scale niche categories with respect to depth, sea-surface temperature, and ice edge association based on synopses of published information. Within a global information system framework and a global grid of 0.5° latitude/longitude cell dimensions, we then generated an index of the relative environmental suitability(RES) of each cell for a given species by relating known habitat usage to local environmental conditions. RES predictions closely matched published maximum ranges for most species, thu! s representing useful, more objective alternatives to existing sketched distributional outlines. In addition, raster-based predictions provided detailed information about heterogeneous patterns of potentially suitable habitat for species throughout their range. We tested RES model outputs for 11 species (northern fur seal, harbor porpoise, sperm whale, killer whale, hourglass dolphin, fin whale, humpback whale, blue whale, Antarctic minke, and dwarf minke whales) from a broad taxonomic and geographic range, using data from dedicated surveys. Observed encounter rates and species-specific predicted environmental suitability were significantly and positively correlated for all but 1 species. In comparison, encounter rates were correlated with <1% of 1000 simulated random data sets for all but 2 species. Mapping of large-scale marine mammal distributions using this environmental envelope model is helpful for evaluating current assumptions and knowledge about species? occurrence! s, especially for data-poor species. Moreover, RES modeling can help to focus research efforts on smaller geographic scales and usefully supplement other, statistical, habitat suitability models.
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A review of the potential effects of disturbance on sea lions: assessing response and recovery.
Kucey, L., and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 581-589.
abstract
Human intrusion within areas of sea lion habitat is increasing worldwide, leading to concerns about disruption of distribution and daily activities of sea lions. Sea lion responses to disturbance can be quantified by recording changes in behavioural patterns, documenting numbers of animals on shore before, during and after the disturbance, or by measuring physiological stress of individual animals. However, assessing recovery is not so straightforward, as highlighted by an example from a study of the short-term effects of disturbance on Steller sea lions. Recovery is generally recognized as a return to an original state or normal condition, but is often operationally defined as a percent-return to pre-disturbance numbers or behaviours. Simple interpretation of disturbance effects can be easily confounded by concurrent natural seasonal changes in behaviours or haulout patterns, or by daily variability in numbers that can be attributed to weather, tidal cycle stage and other factors. Overall, a range of recovery criteria needs to be simultaneously applied when assessing the effects of human disturbance on sea lion populations. Insights gained from research on the effects of disturbance on Steller sea lions may help guide the development of studies undertaken on other species of sea lions.
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Body mass and composition responses to short-term low energy intake are seasonally dependent in Steller sea lions (Eumetopias jubatus).
Kumagai, S., D.A.S Rosen and A.W. Trites. 2006.
Comparative Biochemistry and Physiology 179:589-598.
abstract
Steller sea lions (Eumetopias jubatus) were fed restricted iso-caloric amounts of Pacific herring (Clupea pallasi) or walleye pollock (Theragra chalcogramma) for 8-9 days, four times over the course of a year to investigate effects of season and prey composition on sea lion physiology. At these levels, the sea lions lost body mass at a significantly higher rate during winter (1.6 ± 0.14 kg d-1), and at a lower rate during summer (1.2 ± 0.32 kg d-1). Decreases in body fat mass and standard metabolic rates during the trials were similar throughout the seasons and for both diet types. The majority of the body mass that was lost when eating pollock derived from decreases in lipid mass, while a greater proportion of the mass lost when eating herring derived from decreases in lean tissue, except in the summer when the pattern was reversed. Metabolic depression was not observed during all trials despite the constant loss of body mass. Our study supports the hypothesis that restricted energy intake may be more critical to Steller sea lions in the winter months, and that the type of prey consumed (e.g., herring or pollock) may have seasonally-specific effects on body mass and composition.
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Potential effects of short-term prey changes on sea lion physiology.
Rosen, D.A., D.J. Tollit, A.J. Winship, and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 103-116.
abstract
hanges in the proximate composition of prey can result in a nutritional imbalance in individual animals, regardless of total energy intake. This mechanism has been hypothesized to have contributed to the decline of Steller sea lions (Eumetopias jubatus). Yet little is known about how otariids react physiologically to short-term changes in prey quality and availability. A series of studies with young captive Steller sea lions tested several potential links between prey quality and sea lion health. Body composition (fat to total mass ratio) of animals fed constant, maintenance-level, isocaloric diets of high- or low-lipid prey changed with season, but overall was not aff ected by prey composition. The sea lions appeared to prioritize maintaining core growth rates even when energy was limited, electing to deplete lipid reserves to fulfi ll energy defi cits, resulting in changes in relative body condition. In contrast, sea lions subject to short- term, sub-maintenance diets of high- or low-lipid prey utilized a greater portion of their lipid reserves when losing body mass on low lipid prey. Experiments with diff erent ad libitum feeding regimes indicated that sea lions are readily able to alter food intake levels to compensate for diff erences in prey energy content and, to a lesser degree, prey availability. However, the results also suggest that decreases in prey quality and/or foraging opportunities can readily combine to require food intake levels that are greater than the digestive capacity of the individual. This is particularly true for young animals that may already be living ?on the edge? energetically.
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Changes in diet and maternal attendance of a South American sea lions indicate changes in the marine environment and the abundance of prey.
Soto, K., A.W. Trites, and M. Arias-Schreiber. 2006.
Marine Ecology Progress Series 312:277-290.
abstract
Behavioural observations were made of South American sea lions Otaria flavescens in Peru to determine whether changes in their diet and maternal attendance patterns reflected physical changes in the marine environment and alterations in the abundance and distribution of prey. The study was conducted during the breeding season between 1998 and 2002, which was a period that encompassed a strong El Niño (1997–1998) and a moderate La Niña (1999–2001). Observations revealed strong linkages between maternal attendance patterns and the abundance of prey and oceanographic features close to the rookeries. Acute prey shortage during El Niño resulted in females increasing the length of their foraging trips and decreasing the time they spent onshore with their pups. In contrast, shorter times at sea and longer times onshore were observed during the favourable conditions of La Niña when preferred prey (anchovy and squat lobster) were more abundant near the rookeries. Pup mortalities increased when females spent more time at sea searching for prey and did not return frequently enough to nurse their pups. A larger diversity of prey species (particularly of demersal fishes) was consumed during El Niño when anchovy and lobster were less available. Females appeared to adjust their diets and maternal attendance patterns in response to annual changes in the abundance and distribution of prey. These observations suggested that diet and maternal responses reflect interannual fluctuations of the unpredictable Peruvian upwelling ecosystem, and implied that South American sea lions may be good indicators of relative changes in the distribution and abundance of marine resources.
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Estimating diet composition in sea lions: which technique to choose?
Tollit, D.J., S.G. Heaslip, B.E. Deagle, S.J. Iverson, R. Joy, D.A.S. Rosen and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 293-307.
abstract
Accurate estimates of diets are vital to monitor impacts of sea lion populations on their ecosystems, their interactions with fisheries and to understand the role of food to animal nutrition and health. Approaches include using: (1) prey remnants in stomach contents, spews and scats, (2) prey DNA in scats (3) fatty acid signatures in blubber and (4) stable isotope ratios in predator's tissue. Each methodology has particular advantages and limitations, many of which can be assessed and improved through controlled captive feeding trials. Analysis of prey remnants from captive sea lion scats have shown significant variability in digestion between and within prey species, which coupled with preferential regurgitation and enumeration biases, can confound accurate diet quantification, but does not prevent spatial or temporal comparisons. Correction for partial digestion and use of additional structures besides otoliths can provide accurate prey size estimates. Prey DNA can be reliably isolated from soft remains in scats from captive sea lions and with further development this approach may allow quantification of diet. Genetic methods can be expensive and representative of only one to two days foraging (like prey remnant analysis), but may be less affected by differential digestion and can identify prey in scats that could not be identified through structural remnants. Validation of fatty acid signature analysis to quantify diet at longer temporal scales in sea lions is ongoing, but this new technique promises to be particularly useful to assess biases in traditional methods, identify the onset of weaning and to highlight what prey most contribute to lipid reserves. Stable isotope analysis of predator tissues gives only trophic level data, but can provide data on diet changes on many temporal scales. Remote video monitoring of foraging events and lavage/enema techniques can provide valuable diet information, but, like many newer techniques, animal capture is required. Ideally a suite of techniques should be used to study diet. While methods and correction factors developed for Steller sea lions can likely be applied to the other five sea lion species, they should be verified experimentally.
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Insights into the Timing of Weaning and the Attendance Patterns of Lactating Steller Sea Lions (Eumetopias jubatus) in Alaska During Winter, Spring and Summer.
Trites, A.W., B.P. Porter, V.B. Deecke, A.P. Coombs, M.L. Marcotte and D.A.S. Rosen. 2006.
Aquatic Mammals 32:85-97.
abstract
Behavioral observations of lactating Steller sea lions (Eumetopias jubatus) and their offspring were recorded at 4 haulout sites in Alaska to determine: 1) whether sea lions wean during winter while they are 7-9 months old, and 2) whether sea lions using sites in the Gulf of Alaska (the declining endangered population) made longer foraging trips than sea lions in Southeast Alaska (where the population appeared larger and healthier). Longer foraging trips are commonly thought to be an indicator of nutritional stress. Eight sets of behavioral observations were made using focal and scan sampling techniques at haulouts over 4 years (1995-1998) during 3 seasons (winter, spring and summer). Counter to expectations, we found no significant differences between haulout populations in the time that lactating Steller sea lions spent at sea or on shore. This suggests that sea lions did not have more difficulty capturing prey from winter through summer in the area of decline compared to where sea lion numbers increased. However, lactating Steller sea lions in both regions made longer foraging trips in winter than they did in spring and summer. These changes in foraging patterns between seasons were consistent among all years and sites. The proportion of time that immature Steller sea lions suckled declined through the spring to early summer, suggesting that sea lions began supplementing their milk diet with solid food in the spring. We did not observe any sea lions weaning during winter. Rather, most appeared to wean at the start of the breeding season when they were 1 or 2 y old. Sea lions observed in Southeast Alaska during the late 1990s while population growth was slowing suggest that most males weaned at 2 y, and that about 50% of females weaned at 1 y and the remainder at 2 y.
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Sea Lions of the World.
Trites, A.W., S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea, and K. Wynne (eds). 2006.
Alaska Sea Grant Alaska College Program, University of Alaska, Fairbanks. 664 pages
abstract
The goal of the symposium was to bring together scientists and resource managers to address knowledge of world sea lion populations in order to compare them with Steller sea lions, and to identify research needs. managers to address knowledge of world sea lion populations in order to compare them with Steller sea lions, and to identify research needs.

Changes in the worldwide abundance of sea lions is of growing concern to fisheries and conservation groups, because fisheries are feared to threaten sea lions, and/or because sea lions are feared to threaten fisheries. Over the past few decades, major changes have been noted in the abundance of all five species of sea lions around the world. In the North Pacific, the Steller sea lion has been declared endangered in parts of its range and is considered threatened with extinction in others. This is in contrast to the rapid increase in populations of California sea lions in Mexico and California. Elsewhere, the Japanese subspecies of the California sea lion is probably extinct and the Galapagos subspecies is in low numbers. Numbers of New Zealand sea lions and Australian sea lions are also extremely low, with major declines recently reported in Australia. Relatively little is known about the South American sea lion.

This symposium brought the world community of sea lion researchers and policy makers together to share their experiences and knowledge with each other. Interspecies comparisons can shed light on why some populations might decline while others increase. Insights might also be gained on whether trends in the abundance of sea lions are related to fishing activities through food dependencies or more directly through control or conservation measures. A better understanding of the biology of sea lions is urgently needed. The symposium significantly contributed to the understanding of fluctuating sea lion populations, especially as they compare to the Steller sea lion, by synthesizing current knowledge and forging new directions.

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Effects of fisheries on ecosystems: just another top predator?
Trites, A.W., V. Christensen and D. Pauly. 2006.
In I.L. Boyd, K. Camphuysen and S. Wanless (eds), Top predators in marine ecosystems: their role in monitoring and management. Cambridge University Press, Cambridge. pp. 11-27.
abstract
Apex predators such as pinnipeds, cetaceans, seabirds and sharks, are constrained by the sizes of prey they can consume and thus typically feed within a narrow range of trophic levels. Having co-evolved with their prey, they have influenced the behaviors, physiologies, morphologies and life history strategies of the species they target. In contrast, humans can consume prey of any size from all trophic levels using methods that can rapidly deplete populations. On an ecological time scale, fisheries, like apex predators, can directly affect the abundance of other species by consuming, or out-competing them; or they can indirectly affect the abundance of non-targeted species by removing other predators. However, there is growing evidence that the effects of fisheries go well beyond those imposed by apex predators. Theory and recent observations confirm that the continued development and expansion of fisheries over the past half century has led to a decrease in the! size and life spans of targeted species, with reproduction of fish occurring at earlier ages and at smaller sizes. Also, high levels of fishing have altered the makeup of many ecosystems, depressing the average trophic level of heavily fished ecosystems and speeding up the rate of nutrient turnover within them. An inevitable consequence of fishing down the food web is increased ecosystem instability, unsustainable fisheries and an inability for the ecosystem to support healthy abundant populations of apex predators.
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Food consumption by sea lions: existing data and techniques.
Winship, A.J., A.M.J. Hunter, D.A.S. Rosen, and A.W. Trites. 2006.
In A.W. Trites, S. Atkinson, D.P. DeMaster, L.W. Fritz, T.S. Gelatt, L.D. Rea and K. Wynne (eds), Sea Lions of the World. Alaska Sea Grant College Program, University of Alaska, Fairbanks. pp. 177-191.
abstract
Knowing the quantity of prey that sea lions consume is a prerequisite for assessing the role of sea lions in aquatic ecosystems and the potential for competition to occur with fisheries. We reviewed the different approaches that have been used to estimate the food requirements for the six species of sea lions. We reviewed data on the quantity of food consumed by sea lions in captivity, and examined how consumption varied by species, body size, and season. We also reviewed and quantified available information on the energetics of sea lions and assessed the potential application of these data to parameterize an existing bioenergetic model that was developed to estimate the food requirements of Steller sea lions. Our study provided ranges of estimates of food consumption for sea lions that can be used in various modeling strategies to assess the impact of sea lions on prey populations, including commercially exploited fish species. The approaches reviewed in our study shared common difficulties arising from the quantity and quality of data, and the integration of data across scales and species. Our modeling exercise, in particular, identified the major uncertainties involved in estimating the food requirements of each sea lion species using an energetics approach. Our results provide direction for future research aimed at improving the accuracy and comparability of estimates of food consumption for sea lions.
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Risk of extirpation of Steller sea lions in the Gulf of Alaska and Aleutian Islands: a population viability analysis based on alternative hypotheses for why sea lions declined in western Alaska.
Winship, A.J., and A.W. Trites. 2006.
Marine Mammal Science 22(1):124-155.
abstract
We estimated the risk that the Steller sea lion will be extirpated in western Alaska using a population viability analysis (PVA) that combined simulations with statistically fitted models of historical population dynamics. Our analysis considered the roles that density-dependent and density-independent factors may have played in the past, and how they might influence future population dynamics. It also established functional relationships between population size, population growth rate and the risk of extinction under alternative hypotheses about population regulation and environmental variability. These functional relationships can be used to develop recovery criteria and guide research and management decisions. Life table parameters (e.g., birth and survival rates) operating during the population decline (1978?2002) were estimated by fitting simple age-structured models to time-series of pup and non-pup counts from 33 rookeries (subpopulations). The PVA was carried out by projecting all 33 subpopulations into the future using these estimated site-specific life tables (with associated uncertainties) and different assumptions about carrying capacities and the presence or absence of density-dependent population regulation. Results suggest that the overall predicted risk of extirpation of Stelsler sea lions as a species in western Alaska was low in the next 100 yr under all scenarios explored. However, most subpopulations of Steller sea lions had high probabilities of going extinct within the next 100 yr if trends observed during the 1990s were to continue. Two clusters of contiguous subpopulations occurring in the Unimak Pass area in the western Gulf of Alaska/eastern Aleutian Islands and the Seguam?Adak region in the central Aleutian Islands had relatively lower risks of extinction. Risks of extinction for a number of subpopulations in the Gulf of Alaska were reduced if the increases observed since the late 1990s continue into the fu ture. The risks of subpopulations going extinct were small whe n densit ydependent compensation in birth and survival rates were assumed, even when random stochasticity in these vital rates was introduced.
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2005
 
Infectious disease and the decline of Steller sea lions (Eumetopias jubatus) in Alaska: insights from serology data.
Burek, K.A., F.M.D. Gulland, G. Sheffield, K.B. Beckman, E. Keyes, T.R. Spraker, A.W. Smith, D.E. Skilling, J.E. Evermann, J.L. Stott, J.T. Saliki and A.W. Trites. 2005.
Journal of Wildlife Diseases 41(3):512-524.
abstract
Serology data were examined to determine whether infectious disease may have played a role in the decline of Steller sea lions (Eumetopias jubatus) in the Gulf of Alaska and Aleutian Islands. Available published data, historical unpublished data, and recent collections (1997-2000) were compared and reviewed. Data was stratified by geography in order to compare the declining western Alaska population in the Aleutian Islands regions through eastern Prince William Sound to the increasing population in Southeast Alaska. Prevalences of antibodies from the 1970s to early 1990s were noted for Leptospira interrogans, Chlamydophila psittaci, Brucella spp., phocid herpesvirus 1, and canine parvovirus. Serum samples collected and analyzed from 1997?2000 were tested for antibodies to these agents as well as to caliciviruses, marine mammal morbilliviruses, and canine adenoviruses 1 and 2. Conclusions could not be drawn about changes in the prevalence of exposure to disease agents during the decline of Steller sea lions because data were not comparable either because of inconsistencies in test techniques, or because the samples were either not collected in all decades from all regions or were not tested for antibodies to the same disease agents in different decades. Despite these shortcomings, the available data contained no convincing evidence of significant exposure of Steller sea lions to morbilliviruses, B. spp., canine parvovirus or L. interrogans. Steller sea lions have been exposed to a phocid herpesvirus, caliciviruses, canine adenovirus, and C. psittaci or to cross reactive organisms in regions of both increasing and decreasing sea lion abundance. These disease agents are not likely to have been the primary cause of the decline because they are found at comparable levels in both the increasing and the decreasing populations. However they may have contributed to the decline or impeded recovery of the Steller sea lion population due to undetected mortality and morbidity, or reduction of fecundity and body condition in animals under other stresses. Systematic monitoring for disease agents and their effects is needed to determine whether infectious disease is currently playing a role in the decline and lack of recovery of Steller sea lions.
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Molecular scatology as a tool to study diet: analysis of prey DNA in scats from captive Steller sea lions.
Deagle, B.E., D.J. Tollit, S.N. Jarman, M.A. Hindell, A.W. Trites and N.J. Gales. 2005.
Molecular Ecology 14:1831-1842.
abstract
The DNA of prey present in animal scats may provide a valuable source of information for dietary studies. We conducted a captive feeding trial to test whether prey DNA could be reliably detected in scat samples from Steller sea lions (Eumetopias jubatus). Two sea lions were fed a diet of fish (five species) and squid (one species), and DNA was extracted from the soft component of collected scats. Most of the DNA obtained came from the predator, but prey DNA could be amplified using prey-specific primers. The four prey species fed in consistent daily proportions throughout the trial were detected in more than 90% of the scat DNA extractions. Squid and sockeye salmon, which were fed as a relatively small percentage of the daily diet, were detected as reliably as the more abundant diet items. Prey detection was erratic in scats collected when the daily diet was fed in two meals that differed in prey composition, suggesting that prey DNA is passed in meal specific puls! es. Prey items that were removed from the diet following one day of feeding were only detected in scats collected within 48 hours of ingestion. Proportions of fish DNA present in eight scat samples (evaluated through the screening of clone libraries) was roughly proportional to the mass of prey items consumed, raising the possibility that DNA quantification methods could provide semi-quantitative diet composition data. This study should be of broad interest to researchers studying diet since it highlights an approach that can accurately identify prey species and is not dependent on prey hard parts surviving digestion.
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International survey of scientific collections of Steller sea lions.
Miller, E.H., A.W. Trites, and Oystein, Wiig. 2005.
Fisheries Centre Research Reports Vol 13(6) pp. 69
abstract
We examined or obtained information on specimens of Steller sea lions in museums and other collections. We report on 1740 specimens (complete or partial skulls) in 44 collections in Canada, Germany, Japan, the Netherlands, Russia, the United Kingdom, and the United States. At least several hundred other specimens also exist, mainly in Japan and Russia. Collection dates range from 1842 to the present. Geographically, specimens are well represented in both ?Western? and ?Eastern? regions (separated at 144 W longitude): 509 and 956, respectively. Collection localities within Alaskan regions 2 (Eastern Gulf of Alaska) to 8 (Eastern Bering Sea) are represented by 290 specimens; another 566 specimens are from Japan and Russia and 462 from Alaska region 1 (Southeastern Alaska) southwards. Thus specimens are well spread across the species? breeding range, including areas of population decline. Representation is also good for the period of population decline and earlier per! iods: 442 specimens are from before 1960, 352 from 1960-69, 370 from 1970-79, and 487 from 1980 onwards. There are some problems with quality of data, and with seasonal and geographic representation, but we conclude that ample specimens exist to permit research pertinent to population declines in parts of the species? range.
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The dielectric properties of the cranial skin of five young captive Stellar sea sea lions (Eumetopias jubatus) and a similar number of young domestic pigs (Sus scrofa) and sheep (Ovis aries) between 0.1 and 10 GHz.
Olawale, K.O., R.J. Petrell, D.G. Michelson and A.W. Trites. 2005.
Physiological Measurement 26:626-637.
abstract
To aid in the development of a long-range subcutaneous radio frequency identification tag to monitor the fate sea lion pups, the dielectric properties of the cranial skin of young female otariids, and possible test subjects of similar size and age, or pigs (Sus scrofa) and sheep (Ovis aries)were obtained over a frequency range of 0.1 to 10 GHz at the base of their heads where the tag will be implanted. The resulting curves were similar in shape to adult human skin data, but the values were generally lower. Between ubjects, variations were noted in all the species. Circuitry for the RF-ID tag is being designed to account for antenna detuning as a result of the lossy media or skin and he variation in dielectric properties.

keywords     Keywords: dielectric constant, dielectric loss, skin thickness,
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Examining the potential for nutritional stress in young Steller sea lions: physiological effects of prey composition.
Rosen, D.A.S. and A.W. Trites. 2005.
Journal of Comparative Physiology 175:265-273.
abstract
The effects of high- and low-lipid prey on the body mass, body condition, and metabolic rates of young captive Steller sea lions (Eumetopias jubatus) were examined to better understand how changes in prey composition might impact the physiology and health of wild sea lions and contribute to their population decline. Results of three feeding experiments suggest that prey lipid content did not significantly affect body mass or relative body condition (lipid mass as a percent of total mass) when sea lions could consume sufficient prey to meet their energy needs. However, when energy intake was insufficient to meet daily requirements, sea lions lost more lipid mass (9.16±1.80 kg±SE) consuming low-lipid prey compared with eating high-lipid prey (6.52±1.65 kg). Similarly, the sea lions lost 2.7±0.9 kg of lipid mass while consuming oil-supplemented pollock at maintenance energy levels but gained 5.2±2.7 kg lipid mass while consuming identical energetic levels of herring. Contrary to expectations, there was a 9.7±1.8% increase in metabolism during mass loss on submaintenance diets. Relative body condition decreased only 3.7±3.8% during periods of imposed nutritional stress, despite a 10.4±4.8% decrease in body mass. These findings raise questions regarding the efficacy of measures of relative body condition to detect such changes in nutritional status among wild animals. The results of these three experiments suggest that prey composition can have additional effects on sea lion energy stores beyond the direct effects of insufficient energy intake.
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Dietary analysis from fecal samples: how many scats are enough?
Trites, A.W. and Joy, R. 2005.
Journal of Mammalogy 86(4):704-712.
abstract
Diets of mammals are increasingly being inferred from identification of hard parts from prey eaten and recovered in fecal remains (scats). Frequencies with which particular prey species occur among collections of scats are easily compiled to describe the average diet, and can be used to compare diets between and within geographic regions, and across years and seasons. Important to these analyses is the question of statistical power. In other words, how many scats should be collected to compare the diet among and between species? We addressed this problem using Monte Carlo simulations to analytically determine the consequence of sample size on the dietary analysis of scats using frequency of occurrence methods. We considered two questions: 1) how is the statistical power affected by sample size; and 2) what is the likelihood of not identifying a prey species? We randomly sampled predetermined numbers of scats (n=10–200) from computer-generated populations of scats containing prey of known species and frequencies of occurrences. We also randomly sampled a large database of field-collected scats from Steller sea lions (Eumetopias jubatus). We then used standard contingency table tests such as chi-square and Fisher’s exact test to determine whether differences between our samples and populations were statistically significant. We found a minimum size of 59 scats is necessary to identify principal prey remains occurring in >5% of scats. However, 94 samples are required when comparing diets to distinguish moderate effect sizes over time or between areas. These findings have significant implications for the interpretation of published dietary data, as well as for the design of future scat-based dietary studies for pinnipeds and other species.
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Spatial variation of heat flux in Steller sea lions: evidence for consistent avenues of heat exchange along the body trunk.
Willis, K., M. Horning, D.A.S. Rosen and A.W. Trites. 2005.
Journal of Experimental Marine Biology and Ecology 315:163-175.
abstract
Maintaining insulative fat stores is vital for homeothermic marine mammals foraging in cold polar waters. To accomplish this, animals must balance acquisition and expenditure of energy. If this balance is shifted, body condition can decrease, challenging thermal homeostasis and further affecting energy balance. Prior studies of temperature regulation in sea lions have neither quantified basic all-inclusive heat flux values for animals swimming in cold water, nor determined whether they exhibit consistent spatial patterns of heat flux. Heat flux and skin temperature data were thus collected from four captive Steller sea lions using heat flux sensors (HFSs) with embedded thermistors. Optimal sensor placement was established using infrared thermography to locate the major areas of heat flux along the surface of the animals. Experiments were conducted on swimming animals in a large habitat tank with and without a drag harness, and on stationary animals in a temperature- and current controlled swim flume. All heat flux measurements were corrected by a previously determined correction factor of 3.42 to account for insulative effects of the HFSs and attachment mechanism. Heat flux from shoulders and hips was consistently greater than from mid-trunk and axillary areas in both swimming and stationary animals, suggesting that certain areas of the body are preferentially used to offload excess heat. Mean heat flux for animals swimming with a drag harness was significantly greater than for unencumbered animals, indicating a likely increase in heat production beyond minimum heat loss. Thus, thermal stress does not appear to constitute significant costs for Steller sea lions swimming under conditions of increased drag at speeds of approximately 1 m/s in water temperatures of approximately 8.0 °C.
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2004
 
Validation of a fecal glucocorticoid assay for Steller sea lions (Eumetopias jubatus).
Hunt, K.E., A.W. Trites, and S.K. Wasser. 2004.
Physiology and Behavior 80:595-601.
abstract
The Steller sea lion (Eumetopias jubatus) is listed as endangered in parts of its range and is suspected of suffering from ecological stressors that may be reflected by fecal glucocorticoid hormones. We validated a fecal glucocorticoid assay for this species with an adrenocorticotropic hormone (ACTH) challenge. Feces were collected from captive Steller sea lions (two males and two females) for 2 days before injection with ACTH, and for 4 or more days postinjection. Feces were freeze-dried, extracted with a methanol vortex method, and assayed for glucocorticoids. The assay demonstrated good parallelism and accuracy. All animals showed the expected peak of fecal glucocorticoid excretion after ACTH injection. However, the two males had higher baselines, higher peaks, and more delayed peaks than the females. Peak glucocorticoid excretion occurred at 5 and 28 h postinjection for the two females, and at 71 and 98 h for the two males. Correction for recoveries by the addition of tritiated hormones produced ACTH profiles that were virtually identical in pattern to uncorrected data, but with higher within-sample coefficients of variation. Based on these results, we conclude that this fecal glucocorticoid assay accurately reflects endogenous adrenal activity of Steller sea lions, and that recovery corrections are not necessary for this species when using the methanol vortex extraction method. More research is needed to address possible sex differences and other possible influences on fecal glucocorticoid concentrations.
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Season variation in nutrient composition of Alaskan walleye pollock.
Kitts, D. D., Huynhl,M. D., Hu, C. and Trites, A.W. 2004.
Canadian Journal of Zoology 82:1408-1415.
abstract
A popular hypothesis for the noted steady decline in the population of Steller sea lions in the regions from Prince William Sound through the Aleutian Islands relates to their nutritional status. Sea lion diets appear to have shifted from primarily small schooling fatty fishes to low fat fish such as walleye pollock (Theragra chalcogramma). We examined the seasonal changes in proximate nutrients of pollock collected in the Bering Sea. Mean energy density (dry-weight) of pollock peaked in October then declined and remained low throughout winter. Energy recovery occurred in the summer months with strong recovery observed in female fish caught in July. Contrary to whole fish carcass energy contents, both total protein and moisture contents were at their highest levels in winter (January) when total crude lipid content was at its lowest (p<0.05). This trend gradually declined to its lowest levels in the fall, when lipid content was high. The decline in total lipi! ds during winter seasons appeared to parallel gonad development during the pre-spawning period. Sex differences in energy densities were not found. Nor did proximate analysis data for moisture, protein, ash and lipid content show any significant variation between males and females. Protein digestibility of pollock was higher (p<0.05) in the summer than in the spring, but not different for winter or fall seasons. We conclude that the nutrient content of pollock may have some impact on the Steller sea lions that feed on them, particularly the energetic value that appears to be low during important feeding periods for this marine mammal.
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Suckling attempts during winter by two non-filial Steller sea lion pups (Eumetopias jubatus).
Porter, B.T. and Trites, A.W. 2004.
Mammalia 63:23-26.
abstract
Milk stealing and fostering care is rare among mammals. Among pinnipeds, the nursing of offspring that are not their own has been noted for some species of seals, but rarely for sea lions or fur seals. Thousands of hours have been spent observing Steller sea lions in the wild, but only a few successful suckling attempts have been noted. From January to March 1996, we observed two non-filial pups repeatedly suckling lactating females at a winter haulout site at Timbered Island in southeast Alaska. These two observations are noteworthy because of their rarity and the bearing they have on the poorly understood process of weaning in Steller sea lions. The timing of weaning in Steller sea lions has been speculated to occur sometime during winter or spring when pups are 6 months or older. Both mothers and pups we observed were aggressive toward intruding conspecifics and were very protective of their mother’s teats. However, there was a range of individual variation in the tolerance of both mature females and their offspring to the distance they would allow strange pups near the teats. It is undoubtedly advantageous for nutritionally stressed pups to attempt to steal milk, compared with the alternative — starvation. However the potential for injury likely out-weighs any gain in resources and probably deters most young from attempting to approach strange females. The pups we observed stealing milk did not supplement their intake with fish despite the apparent ability of this age group to capture prey. The fact that they did not suggests that they may not have been behaviourally or physiologically capable of consuming fish. Compared with milk, they may also not be physically capable of consuming enough prey to meet their daily energy needs during this period of rapid growth and development. This further suggests that weaning of Steller sea lions pups may occur much later in spring or early summer than many have previously thought.
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Searching for stress: Hematological indicators of nutritional inadequacies in Steller sea lions.
Rosen, D.A.S., Hastie, G.D., Trites, A.W. 2004.
Symposia of the Comparative Nutrition Society 2004 5:145-149.
abstract
This experiment examined the response of a suite of hematologic parameters to experimentally induced nutritional stress in a group of captive Steller sea lions. The goal was to identify a suite of parameters that could be used to diagnose comparable conditions among wild Steller sea lions. Previous studies, many with ruminant mammals, have shown that there are significant changes in blood characteristics with nutritional status. However, it is equally clear that there is no overwhelming choice of blood parameter to indicate nutritional stress across different species. Therefore, species-specific empirical tests such as the one carried out in the current study are essential to place results from wild studies in a biologically meaningful context.
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Satiation and compensation for short-term changes in food quality and availability in young Steller sea lions (Eumetopias jubatus).
Rosen, D.A.S. and Trites, A.W. 2004.
Canadian Journal of Zoology pp. 1061-1069.
abstract
Foraging theory predicts that animals should proportionately increase their food intake to compensate for reduced energy content and/or prey availability. However, the theoretical intake levels will – at some point – exceed the digestive capacity of the predator. We tested the ability of Steller sea lions (Eumetopias jubatus, Schreber, 1776) to compensate for short-term changes in prey energy density and availability, and quantified the maximum amount of food a young sea lion could consume. Five 1-2 year old captive Steller sea lions were alternately offered herring (high-energy) or capelin (low-energy) each day or every second day. When prey were available on a daily basis the sea lions compensated for differences in the energy content of herring and capelin by consuming sufficient quantities of each (8.3 vs. 14.0 kg d-1, respectively) to maintain an equivalent gross energy intake. When herring was available only on alternate days, the sea lions increased their consumption by 52% to 11.5 kg d-1, which was not sufficient to maintain an average gross intake equal to when herring was available every day. When capelin was available only on alternate days, some animals increased their intake for a few days, but average intake (15.2 kg d-1) was far below levels observed during daily feeding. Generally, the sea lions appeared to reach their digestive limit at a level equivalent to 14-16% of their body mass. Our findings suggest that Steller sea lions can alter their food intake in response to short-term changes in prey quality or availability, but that these variables can quickly combine to necessitate food intake levels that exceed the physiological digestive capacities of young animals.
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Searching for stress:Hematological indicators of nutritional inadequacies in Steller sea lions.
Rosen, D.A.S., G.D. Hastie and A.W. Trites. 2004.
Symposia of the Comparative Nutrition Society 2004 5:145-149.
abstract
This experiment examined the response of a suite of hematologic parameters to experimentally induced nutritional stress in a group of captive Steller sea lions. The goal of this study was to identify a suite of parameters that could be used to diagnose comparable conditions among wild Steller sea lions. The experiments were conducted with four captive female Steller sea lions. They were alternated between isocaloric diets of Atka mackerel (4.9-6.7% lipid w.w.) and herring (10.3-13.4% lipid). The level of food intake (~35.6 kJ d-1) was set a priori at a level estimated to produce a 10-15% loss of initial body mass over the 29-day trials. Body mass was measured daily (± 0.1 kg), and body composition was determined at the start and end of each trial by deuterium dilution technique. Nine of the blood parameters measured in this study showed consistent changes over the 29-day period of induced nutritional stress. White blood cell counts, platelet counts, phosphorous levels, alkaline phosphatase levels, and serum Fe levels all showed consistent decreases, whilst red blood cell counts, hemoglobin levels, hematocrit levels, and gamma GT levels, showed consistent increases. Only one of the blood parameters showed a significantly different response in relation to diet - blood urea nitrogen (BUN) levels showed a consistent increase on the Atka mackerel diet and a consistent decrease on the herring diet (P=0.029). Sea lions on the Atka mackerel diet showed a mean percentage increase in BUN level of 9.2%, and a mean percentage decrease of 4.9% on the herring diet. Previous studies, many with ruminant mammals, have shown that there are significant changes in blood characteristics with nutritional status. However, it is equally clear that there is no overwhelming choice of blood parameter to indicate nutritional stress across different species. Therefore, species-specific empirical tests such as the one carried out in the current study are essential to place results from wild studies in a biologically meaningful context.
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The effects of prey availability on pup mortality and the timing of birth of South American sea lions (Otaria flavescens) in Peru.
Soto, K., A.W. Trites, and M. Arias-Schreiber. 2004.
Journal of Zoology 264:419-428.
abstract
Pup mortality and the timing of birth of South American sea lions Otaria flavescens were investigated to determine the possible relationship between fluctuations in prey availability in the Peruvian upwelling ecosystem and current and future reproductive success of sea lions during six consecutive breeding seasons. Our study from 1997 to 2002 encompassed the strongest El Nino on record and one La Nina event. Pup mortality ranged from 13% before El Nino to 100% during El Nino, and was negatively correlated with prey availability. Abortions were also more frequent when prey availability was low. However, pup mortality remained high following El Ni~no due to the punctuated short-term effects it had on population dynamics and subsequent maternal behaviour. Births occurred later in the season after years of low food availability and earlier following years of high food availability. The peak of pupping coincided with the peak of mortality in all years, and may have ! been the product of intensive competition between bulls at the peak of the breeding season. The stronger and more frequent El Ninos that appear to be occurring along the Peruvian coast may produce significant stochastic changes in future births and pup mortality, which may place the vulnerable South American sea lion population in Peru at greater risk.
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Sizes of walleye pollock (Theragra chalcogramma) consumed by the eastern stock of Steller sea lions (Eumetopias jubatus) in Southeast Alaska from 1994-1999.
Tollit, D.J., Heaslip, S.G. and Trites, A.W. 2004.
Fishery Bulletin 102(3):522-532.
abstract
Lengths of walleye pollock (Theragra chalcogramma) consumed by Steller sea lions (Eumetopias jubatus) were estimated using allometric regressions applied to seven diagnostic cranial structures recovered from 531 scats collected in Southeast Alaska between 1994-1999. Selected structural measurements were corrected for loss of size due to erosion using experimentally derived condition-specific digestion correction factors. Correcting for digestion increased the estimated length of fish consumed by 23%, and the average mass of fish consumed by 88%. Mean corrected fork length (FL) of pollock consumed was 42.4 11.6 cm (range=10.0-78.1 cm, n=909). Adult pollock (>45.0 cm FL) occurred more frequently in scats collected from rookeries along the open ocean coastline of Southeast Alaska during June and July (74% adults, mean FL=48.4 cm) than they did in scats from haulouts located in inside waters between October and May (51% adults, mean FL=38.4 cm). Overall, the contribution of juvenile pollock (20 cm) to the sea lion diet was insignificant, while adults contributed 44% to the diet by number and 74% by mass. On average, larger pollock were eaten in summer at rookeries throughout Southeast Alaska than at rookeries in the Gulf of Alaska or the Bering Sea. Overall it appears that Steller sea lions are capable of consuming a wide size range of pollock, with the bulk of fish falling between 20-60 cm. The use of cranial hard parts other than otoliths and the application of digestion correction factors are fundamental to correctly estimating the sizes of prey consumed by sea lions and for determining their overlap with commercial fisheries.
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A method to improve size estimates of walleye pollock (Theragra chalcogramma) and Atka mackerel (Pleurogrammus monopterygius) consumed by pinnipeds: digestion correction factors applied to bones and otoliths recovered in scats.
Tollit, D.J., Heaslip, S.G., Zeppelin, T.K., Joy, R., Call, K.A. and Trites, A.W. 2004.
Fishery Bulletin 102(3):498-508.
abstract
The lengths of otoliths and other skeletal structures recovered from the scats of pinnipeds, such as Steller sea lions (Eumetopias jubatus), correlate with body size and can be used to estimate the length of prey consumed. Unfortunately, otoliths are often found in too few numbers or are too digested to usefully estimate prey size. Techniques are therefore required to account for the degree of digestion of alternative diagnostic bones prior to estimating prey size. We developed a method (using defined criteria and photo-reference material) to assign the degree of digestion for key cranial structures of two prey species (walleye pollock, Theragra chalcogramma and Atka mackerel, Pleurogrammus monopterygius). The method grades each structure into one of three condition categories; good, fair or poor. We also conducted captive feeding trials to determine the extent of erosion and derive condition-specific digestion correction factors to reconstruct the original sizes of the structures consumed. In general, larger structures were relatively more digested than smaller ones. Mean size reduction varied between different types of structures (3.3-26.3%), but was not influenced by the size of the prey consumed. Results from the observations and experiments were combined to reconstruct the size of prey consumed by sea lions and other pinnipeds. The proposed method has four steps: 1) measure the recovered structures and grade the extent of digestion using defined criteria and photo-reference collection; 2) exclude structures graded in poor condition; 3) multiply measurements of structures in good and fair condition by their appropriate digestion correction factors to derive their original size; and 4) calculate the size of prey from allometric regressions relating corrected structure measurements to body lengths. This technique can be readily applied to piscivore dietary studies that use fish hard remains.
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Whales, whaling and ecosystem change in the Antarctic and Eastern Bering Sea: insights from ecosystem models.
Trites, A. W.,Bredesen, E.L. and Coombs,A.P. 2004.
In Investigating the roles of cetaceans in marine ecosystems. Monaco: CIESM Workshop Monographs pp. 85-92.
abstract
Ecosystem models were constructed for the Antarctic and the Bering Sea that incorporate current understanding of biological interactions of species within the ecosystem (i.e., who eats whom and how much). Within the limitations that are inherent to simulations, both models suggest that removal of large whales had little measurable effect on lower trophic levels or on the dynamics of other species in their polar ecosystems. Trophic interactions failed to explain the magnitude of changes in the biomass of the major species groups in the Antarctic and Bering Sea. Nor did fin-fisheries appear to have had a significant effect on the abundance of non-targeted species. This may mean that environmental effects (which were not modeled) play an important role in influencing the dynamics of marine ecosystems. Oceanographic factors such as changes in water temperature or ocean currents likely result in variations in ecosystem production and species recruitment patterns which are not captured by our Ecopath models. The Ecopath modeling approach is a powerful means of synthesizing knowledge about ecosystems and the factors that influence ecosystem dynamics. They provide a straightforward means for estimating trophic levels and niche overlaps with other species to assess the potential for resource competition. While the models failed to support the hypotheses that large whales play a significant structural role in the Antarctic and Bering Sea ecosystems, they do support what most already know ?- i.e., that populations of large whales are easily reduced to low numbers, but take a long, long time to recover. They also help in recognizing the need to consider factors other than food web interactions when assessing the status of cetaceans, as well as highlighting the potential tradeoffs that can result when other species are removed from ecosystems.
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2003
 
Disease agents in Steller sea lions in Alaska: A review and analysis of serology data from 1975-2000.
Burek, K.A., F.M.D. Gulland, G. Sheffield, D. Calkins, E. Keyes, T.R. Spraker, A.W. Smith, D.E. Skilling, J. Evermann, J.L. Stott and A.W. Trites. 2003.
Fisheries Centre Reports Vol 11(4) pp. 26
abstract
Results of serology studies conducted from 1975-1996 on Alaskan populations of Steller sea lions(Eumetopias jubatus) were synthesized and supplemented with analyses of archived sera to assess the chronological and spatial patterns of exposure to disease agents and the role that infectious disease may have played in the decline of Steller sea lions in the Gulf of Alaska and Aleutian Islands. Serum samples were obtained during three periods (1970s, 1980s and 1990s) and were tested for exposure to Leptospira interrogans, caliciviruses, Chlamydophila sittaci, Brucella sp, morbilliviruses, influenza A, oxoplasma gondii, phocid herpesviruses and canine parvovirus. Testing for these agents and canine adenoviruses 1 and 2 continued through 2000. In most cases, conclusions cannot be drawn about chronological changes in the prevalence of disease agents during the decline of Steller sea lions because the samples were not collected from all regions in each time period, nor from sufficient numbers of animals in each age class. In addition, samples were not all analyzed by the same laboratories, were not stored under controlled conditions, were not tested for the same disease agents, and assays were not validated for Steller sea lions.

There is no convincing evidence of significant exposure to influenza A, morbilliviruses, Brucella abortus, canine parvovirus and Leptospira sp. However, there is evidence of exposure to a herpesvirus, C. psittaci, caliciviruses, T. gondii and canine adenovirus in regions of both increasing and decreasing sea lion abundance. As these agents are either present throughout the areas examined, or were not evident in all of the animals examined, it is unlikely that these disease agents caused the population decline of sea lions by epidemic mortality. However, as the number of samples tested for morbillivirus is low, and the assays used have not been validated for Steller sea lions, exposure to a morbillivirus during the peak of the decline cannot be completely ruled out from the data available.

Some pathogens become endemic and interact with malnutrition or predation to decrease survival or reproduction—therefore preventing recovery of depleted populations. In other species, C. psittaci, herpesviruses, adenoviruses, and T. gondii are more readily expressed as clinical diseases when individuals are stressed. It is possible that these agents could be contributing to the lack of recovery by causing undetected mortality and morbidity, or by reducing fecundity and juvenile survival rates. A systematic disease agent monitoring protocol should therefore be initiated to adequately test for disease agents in different time periods and regions.

Serological studies are limited in that they only assess immunological response following exposure to infectious agents. They do not give information on the prevalence of disease agents, or on presence of clinical disease. Further sstudies should be aimed at detecting infectious agents directly, and determining their association with morbidity and mortality, as well as changes in host population dynamics.

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Assessing impacts of contaminants on marine mammals and human health in the eastern Bering Sea.
Coombs, A.P., Trites, A.W., Pauly, D. 2003.
Society for Marine Mammalogy, 15th Biennial Conference on the Biology of Marine Mammals pp. 35
abstract
Persistent organic pollutants (POPs) are lipophilic, resist degradation, and readily accumulate in marine mammal and fish tissue. As a consequence of their trophic level and longevity, marine mammals are particularly susceptible to high POP contamination. POPs, such as polychlorinated biphenyls (PCBs), are considered possible contributors to marine mammal population declines in the eastern Bering Sea. Using ecosystem modeling software (Ecopath with Ecosim - EwE), we identified likely pathways of contaminant flow within the eastern Bering Sea and evaluated health implications of contaminant exposure for Steller sea lions, other species of marine mammals, and humans. Ecotrace (a component of the EwE software) tracked the bioaccumulation of contaminants moving through the system with biomass. Data deficiencies were identified and the model estimated contaminant concentrations for species and functional groups that have not previously been measured. Results of the model suggest t hat PCB concentrations for most species in the eastern Bering Sea have remained below benchmark levels associated with reproduction and survival effects on mammals. However, these concentrations may have subtle neurobehavioral effects, particularly in neonates and nursing young, which could inhibit the recovery of Steller sea lions and other species that have declined in the Bering Sea. Although for humans, the benefits of traditional foods appear to continue to outweigh the risks posed by contaminants, PCB exposure and dietary intake is above the USEPA Daily Reference Dose for many Alaska Natives subsisting on marine mammals. Our results are important for management alternatives for marine mammals and human health, and synthesize evidence regarding the presence, extent and movement of PCBs in the eastern Bering Sea ecosystem.
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Possible effects of pollock and herring on the growth and reproductive success of Steller sea lions: insights from feeding experiments using an alternative animal model, Rattus novegicus.
Donnelly, C.P., A.W. Trites and D.D. Kitts. 2003.
British Journal of Nutrition 89:71-82.
abstract
The decline of Steller sea lions (Eumetopias jubatus) in the Gulf of Alaska appears to have been associated with a switch of diet from one dominated by fatty forage fishes (such as her-ring; Clupea pallasi ) to one dominated by low-fat fish (such as pollock; Theragra chalco-gramma). Observations made during the decline include reduced body size of sea lions, low pregnancy rates, and high mortality. We used the general mammalian model, the laboratory rat (Rattus norvegicus ), to test whether changing the quality of prey consumed could cause changes in size and reproductive performance. Five groups of twelve fiale, weanling rats were fed diets composed of herring (H), pollock (P), pollock suppliented with herring oil (PH), pollock suppliented with pollock oil (PP), or a sii-purified diet (ICN). Mean body weights were greatest for H, followed by PH, P, PP and finally ICN, although ICN was the only group significantly different from the others (P 0·05). Food intakes before mating were 10 % higher for groups on the lower-fat diets (P and ICN), resulting in similar energy intakes in all groups. The protein efficiency ratio was highest for the H diet, slightly lower for all pollock diets, and significantly lower for ICN (P 0·05). The fetal weights for mothers fed P were significantly reduced (P 0·05). The present study shows that the energy content was a major limiting factor in the nutritional quality of pollock. When food intake was adjusted to meet energetic requirients, there were no detrimental consequences from eating pollock. However, supplientation of pollock meal with additional pollock oil may reduce growth and reproductive performance, although the reasons for this were not apparent.
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Predicting metabolic rate from heart rate for juvenile Steller sea lions Eumetopias jubatus.
McPhee, J.M., D.A.S. Rosen, R.D. Andrews and A.W. Trites. 2003.
Journal of Experimental Biology 206:1941-1951.
abstract
The validity of using heart rate to estimate energy expenditure in free-ranging Steller sea lions Eumetopias jubatus was investigated by establishing whether there is a relationship between heart rate (fH) and oxygen consumption rate (V . O·) in captive sea lions while swimming and resting. Four trained Steller sea lions (2 males and 2 females; mass 87.4–194.4·kg; age 16 months– 3 years) were each equipped with a datalogger and two dorsal subcutaneous electrodes to record electrocardiograms from which fH was calculated. V . O· (measured using open-circuit respirometry) was simultaneously recorded while the previously fasted animals were at rest within an enclosed dry metabolic chamber or while they swam in an enclosed swim mill against water currents of various speeds (0–1.5·m·s –1 ). The mean regression equation describing the relationship between fH (beats·min –1 ) and V . O· (ml·h –1 ·kg –0.60 ) for all four animals was V . O·=(71.3fH±4.3)–(1138.5±369.6) (means ± S.E.M.) (r 2 =0.69, P<0.01). The relationship demonstrated between fH and V . O· while fasting suggests that heart rate can potentially be used to monitor energy consumption in free-ranging Steller sea lions. However, a short-term feeding experiment revealed no significant increase in heart rate following a 6·kg or 12·kg meal to match the observed increase in rate of oxygen consumption. This suggests that heart rate may not accurately reflect energy consumption during digestion events. Additional research should be conducted to further elucidate how the relationship between heart rate and oxygen consumption is affected by such factors as digestive state, stress and age.
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Maternal attendance patterns of lactating Steller sea lions (Eumetopias jubatus) from a stable and a declining population in Alaska.
Milette, L.L. and A.W. Trites. 2003.
Canadian Journal of Zoology 81:340-348.
abstract
Maternal attendance patterns of Alaskan Steller sea lions (Eumetopias jubatus) were compared during the summer breeding seasons in 1994 and 1995 at Sugarloaf Island (a declining population) and Lowrie Island (a stable population). Our goal was to determine whether there were differences in maternal attendance between the two populations that were consistent with the hypothesis that lactating Steller sea lions in the area of decline were food-limited during summer. Our a priori expectations were based on well-documented behavioural responses of otariids to reduced prey availability. We found that foraging trips were significantly shorter in the area of population decline, counter to initial predictions. The mean length of foraging trips in the declining area was 19.5 h compared with 24.9 h in the stable area. In contrast, the mean perinatal period (time between parturition and first feeding trip) was significantly longer in the area of decline (9.9 versus 7.9 days), again countering initial predictions. The mean length of shore visits for the declining population was also significantly longer (27.0 h compared with 22.6 h where the population was stable). For both populations, the mean time that mothers foraged increased as pups grew older, whereas the time that they spent on shore with their pups became shorter. Behavioural observations of maternal attendance patterns are inconsistent with the hypothesis that lactating Steller sea lions from the declining population had difficulty obtaining prey during summer.
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No evidence for bioenergetic interaction between digestion and thermoregulation in Steller sea lions, Eumetopias jubatus.
Rosen, D.A.S. and A.W. Trites. 2003.
Physiological and Biochemical Zoology 76(6):899-906.
abstract
The increase in metabolism during digestion—the heat increment of feeding—is often regarded as an energetic waste product. However, it has been suggested that this energy could offset thermoregulatory costs in cold environments. We investigated this possibility by measuring the rate of oxygen consumption of four juvenile Steller sea lions (Eumetopias jubatus) before and after they ingested a meal in water temperatures of 2-8 degrees C. Rates of oxygen consumption of fasted and fed animals increased in parallel with decreasing water temperature, such that the apparent heat increment of feeding did not change with water temperature. These results suggest that Steller sea lions did not use the heat released during digestion to offset thermoregulatory costs.
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Quantifying errors associated with using prey skeletal structures from fecal samples to determine the diet of the Steller sea lion (Eumetopias jubatus).
Tollit, D.J., M. Wong, A.J. Winship, D.A.S. Rosen and A.W. Trites. 2003.
Marine Mammal Science pp. 724-744.
abstract
We examined the digestion and passage times of bones and other hard parts from pollock, herring, salmon, and sandlance recovered from two juvenile captive Steller's sea lions (Eumetopias jubatus) subjected to varying activity levels. Key bones that could be identified to species were distributed over an average of 3.2 scats (range 1–6) following a single meal, with pollock remains occurring in significantly more scats than other species. Relying on otoliths alone to determine the presence of prey resulted in significantly fewer prey being identified than if other structures were also used (such as vertebrae, jaw bones, and teeth), particularly for salmon. Using either technique, there were significant differences in the likelihood that bones would be recovered from the series of scats produced following a meal, with pollock recovery exceeding herring (by three-fold) and sandlance (by eight-fold). Differences between species were reduced when recovery was calculated on a per scat basis rather than over multiple scats. Active animals passed greater numbers of bones, but the overall effect on prey recovery estimates was not significant. Defecation times of prey structures from a meal were variable and ranged from an initial 2–56 h to a final 28–148 h. The time interval to pass 95% of recovered structures varied by a factor of two among prey species, and was highest for pollock due to retention beyond 65 h.
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Food webs in the ocean: who eats whom, and how much?
Trites, A.W. 2003.
In M. Sinclair and G. Valdimarsson (eds), Responsible Fisheries in the Marine Ecosystem. FAO, Rome and CABI Publishing, Wallingford. pp. 125-143.
abstract
Over 100 food webs have been published for marine cosystems to describe the transfer of food energy from its source in plants,through herbivores,to carnivores and higher order predators.The webs suggest that the lengths of the chains that form food webs are typically short (3 –4 links),and that ecosystems with long food chains may be less stable than those with shorter food chains.

Stomach contents have been the primary means for determining what marine organisms eat.More recently developed techniques include faecal analysis and fatty acid signatures from blood or fat samples. Consumption has been estimated from the volume of food found in stomachs,from the feeding rates of captive individuals and from bioenergetic modelling.Consumption of marine organisms,expressed as a percentage of an individual ’s body weight per day,ranges from about 4 –15% or zooplankton,to 1 –4% for cephalopods,1 –2%for fish,3 –5% or marine mammals and 15 –20%for sea birds.Immature age classes consume about twice as much (per unit of body weight)as do mature individuals. Furthermore,consumption is not constant throughout the year,but varies with seasonal periods of growth and reproduction.Most groups of species consume 3 –10 times more than they produce,and export or pass up the food web about 70 –95%of their production. Marine organisms tend to be larger at successive trophic levels and are limited in the sizes of food they can consume. Humans are one of the few species that can prey uponalmost any level of the food chain and any size of prey.

Food web analysis and estimates of consumption are essential for understanding which ecosystems can support additional species,and which may be less stable and susceptible to species loss through the synergistic effects of fishing or culling.They are also critical tools for understanding changes in ecosystem dynamics as highlighted by a case study from the eastern Bering Sea.

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The decline of Steller sea lions in Alaska: A review of the nutritional stress hypothesis.
Trites, A.W. and C.P. Donnelly. 2003.
Mammal Review 33:3-28.
abstract

1. The decline of Steller sea lions Eumetopias jubatus in the Gulf of Alaska and Aleutian Islands between the late 1970s and 1990s may have been related to reduced availability of suitable prey. Many studies have shown that pinnipeds and other mammals suffering from nutritional stress typically exhibit reduced body size, reduced productivity, high mortality of pups and juveniles, altered blood chemistry and specific behavioural modifications.

2. Morphometric measurements of Steller sea lions through the 1970s and 1980s in Alaska indicate reduced body size. Reduced numbers of pups born and an apparent increase in juvenile mortality rates also appear to be nutritionally based. Blood chemistry analyses have further shown that Steller sea lions in the Gulf of Alaska and Aleutian Islands area exhibited signs of an acute phase reaction, or immune reaction, in response to unidentified physical and/or environmental stress. Behavioural studies during the 1990s have not noted any changes that are indicative of an overall shortage in the quantity of prey available to lactating female sea lions.

3. The data collected in Alaska are consistent with the hypothesis that Steller sea lions in the declining regions were nutritionally compromised because of the relative quality of prey available to them (chronic nutritional stress), rather than because of the overall quantity of fish per se (acute nutritional stress). This is further supported by captive studies that indicate the overall quality of prey that has been available to Steller sea lions in the declining popu-lation could compromise the health of Steller sea lions and hinder their recovery.


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Prey consumption of Steller sea lions (Eumetopias jubatus) off Alaska: how much prey do they require?
Winship, A.J. and A.W. Trites. 2003.
Fishery Bulletin 101:147-163.
abstract
The effects of seasonal and regional differences in diet composition on the food requirements of Steller sea lions (Eumetopias jubatus)were estimated by using a bioenergetic model. The model considered differences in the energy density of the prey, and differences in digestive effciency and the heat increment of feeding of different diets. The model predicted that Steller sea lions in southeast Alaska required 45–60% more food per day in early spring (March) than after the breeding season in late summer (August) because of seasonal changes in the energy density of the diets (along with seasonal changes in energy require ments).The southeast Alaska population,at 23,000 (±1660 SD)animals (all ages), consumed an estimated 140,000 (±27,800) of prey in 1998. In contrast, we estimated that the 51,000 (±3680) animals making up the western Alaska population in the Gulf of Alaska and Aleutian Islands consumed just over twice this amount (303,000 [±57,500 ] t). In terms of biomass removed in 1998 from Alaskan waters,we estimated that Steller sea lions accounted for about 5% of the natural mortality of gadids (pollock and cod) and up to 75% of the natural mortality of hexagram mids (adult Atka mackerel).These two groups of species were consumed in higher amounts than any other.The predicted average daily food require ment per individual ranged from 16 (±2.8)to 20 (±3.6)kg (all ages com bined). Per capita food requirements differed by as much as 24% between regions of Alaska depending on the rel ative amounts of low–energy-density prey (e.g.gadids)versus high–energy density prey (e.g. forage fish and salmon)consumed. Estimated require ments were highest in regions where Steller sea lions consumed higher proportions of low—energy-density prey and experienced the highest rates of population decline.
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2002
 
Foraging behavior and energetics of adult female Steller sea lions.
Andrews, R.D., D.G. Calkins, R.W. Davis, B.L. Norcross, K. Peijnenberg and A.W. Trites. 2002.
In D. DeMaster and S. Atkinson (eds), Steller sea lion decline: Is it food II. University of Alaska Sea Grant, AK-SG-02-02, Fairbanks. pp. 19-22.
abstract
In June 1997,we conducted a test of the hypothesis that the current Steller sea lion decline is due to nutritional stress. Steller sea lions were studied at two of the central Aleutian Islands, Seguam and Yunaska, and at the Forrester Island rookery complex in southeast Alaska. Trip durations and the percent time spent at sea were much shorter for Steller sea lions from Seguam Island compared to those from the Forrester Island rookery. Dives at Seguam Island were shorter and shallower, but more frequent than those at Forrester Island The short trips at Seguam Island generally consisted of a single bout of uninterrupted dive cycles while at Forrester Island the trips were broken into dive bouts of varying length separated by periods spent traveling or resting at the surface. However, on average, the percent of a trip spent submerged was not significantly different. Another measure of foraging effort, the vertical travel distance per unit time at sea, was about 1. 5 times greater for Steller sea lions at Forrester Island. The at-sea field metabolic rates, however, were similar for both groups. Data on the time and distance elapsed from departure on a foraging trip until commencement of “foraging dives ” shows that at both rookeries Steller sea lions appear to begin searching for prey very soon after entering the water. However , the mean time from departure to first prey ingestion, identified by the stomach temperature record, was about five times longer for Steller sea lions at Forrester Island than at Seguam Island. The rough estimation of prey intake rate at Seguam Island was about two times greater than at Forrester Island. Therefore, it would appear that in 1997,adult female Steller sea lions at Seguam Island found suitable prey more quickly, and once they found it were able to ingest it at a much higher rate than Steller sea lions at Forrester Island. From this study it appears that a directly measured difference in prey availability may account for the observed difference in prey capture rate. This greater capture rate by Steller sea lions at Seguam Island may partially explain the greater pup growth rates observed there compared to Forrester Island. The lack of a single highly abundant prey species and the larger Steller sea lions population at Forrester Island may result in longer search times for Forrester Island Steller sea lions. An important value of this and the related studies to date is that we were able to demonstrate a correlation between prey availability, foraging success, and pup growth, a parameter that is potentially indicative of future survival and therefore adult female reproductive success.
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Ecological effects of regime shifts in the Bering Sea and eastern North Pacific Ocean.
Benson, A.J. and A.W. Trites. 2002.
Fish and Fisheries 3:95-113.
abstract
Large-scale shifts occurred in climatic and oceanic conditions in 1925, 1947, 1977, 1989 and possibly 1998. These shifts affected the mix and abundance of suites of coexisting species during each period of relative environmental stability- from primary producers to apex predators. However, the 1989 regime shift was not a simple reversal of the 1977 shift. The regime shifts occurred abruptly and were neither random variations nor simple reversals to the previous conditions. Timing of these anomalous environmental events in the North Pacific Ocean appears to be linked to physical and biological responses in other oceanic regions of the world. Changes in the atmospheric pressure can alter wind patterns that affect oceanic circulation and physical properties such as salinity and depth of the thermocline. This, in turn, affects primary and secondary production. Data from the North Pacific indicate that regime shifts can have opposite effects on species living in different domains, or can affect similar species living within a single domain in opposite ways. Climatic forcing appears to indirectly affect fish and marine mammal populations through changes in the distribution and abundance of their predators and prey. Effects of regime shifts on marine ecosystems are also manifested faster at lower trophic levels. Natural variability in the productivity of fish stocks in association with regime shifts indicates that new approaches to managing fisheries should incorporate climatic as well as fisheries effects.
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Classifying prey hard part structures recovered from fecal remains of captive Steller sea lions (Eumetopias jubatus).
Cottrell, P.E. and A.W. Trites. 2002.
Marine Mammal Science 18:525-539.
abstract
Feces were collected from six Steller sea lions (Eumetopias jubatus) that consumed known amounts of Atka mackerel (Pleurogrammus monopterygius), Pacific herring (Clupea harengus), pink salmon (Oncorhynchus gorbuscha), walleye pollock (Theragra chalcogramma), and squid (Loligo opalacens). The goal was to determine the numbers and types of taxon-specific hard parts that pass through the digestive tract and to develop correction factors for certain abundantly occurring structures. Over 20,000 fish and squid were consumed during 267 d of fecal collection. During this period, over 119,000 taxon-specific hard parts, representing 56 different structures, were recovered. Skeletal structures and non-skeletal structures accounted for 72% and 28% of all hard parts respectively. The branchiocranium, axial skeleton, and dermocranium regions of the skeletal system accounted for the greatest number of hard parts recovered. Over 70% of all recovered hard parts were represented by one to six taxa specific structures for each prey type. The average number of hard parts (3.1-3.12) and structure types (2.0-17.7) recovered per individual prey varied across taxa and were used to derive correction factors (to reconstruct original prey numbers). A measure of the variability of hard part recovery among sea lions showed no difference for certain herring, pollock, and squid structures, however, there was a significant difference for salmon and Atka mackerel structures. Identifying all taxon-specific prey hard parts increases the likelihood of identifying and estimating the number of prey consumed.
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Diets of fin, sei and sperm whales in British Columbia: an analysis of commercial whaling records, 1963-1967.
Flinn, R.D., A.W. Trites, E.J. Gregr and I. Perry. 2002.
Marine Mammal Science 18:663-679.
abstract
Diets of fin (Balaenoptera physalus), sei (Balaenoptera borealis), and sperm whales (Physeter macrocephalus) were estimated from the stomach contents of individuals killed along the British Columbia coast from 1963 to 1967. The dominant prey types of fin whales were euphausiids, with minor contributions from copepods and fish. Sei whale stomachs contained primarily copepods in three years, whereas euphausiids or a variety of fish dominated the diet in the other two years. Sperm whales consumed primarily North Pacific giant squid (Moroteuthis robusta), but secondary prey differed between males and females. Female sperm whales frequently consumed ragfish (Icosteus spp.) and other fish, whereas the male diet also contained rockfish (Sebastes spp.). The high abundance of euphausiids along the British Columbia coast likely contributed to the presence of a summer resident population of fin whales. The high abundance of large copepods farther north probably influenced the migration of sei whales through the offshore waters of British Columbia. Sperm whale stomach contents differed by sex reflecting location and possibly breeding behaviors.
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Harbour porpoise interactions with the 2001 selective salmon fisheries in southern British Columbia and license holder reported small cetacean by-catch.
Hall, A., G.E. Ellis and A.W. Trites. 2002.
Selective Salmon Fisheries Science Program Report.
abstract
We estimated the incidental mortality of harbor porpoise (Phocoena phocoena) in selective salmon fisheries in southern British Columbia from reports received from federal fisheries observers (2001) and license holders (1997 - 2001). Data sheets were developed to record prevailing conditions at the time of a harbor porpoise entanglement event. These were incorporated into the existing Federal Fisheries Observer Program. Data collection occurred throughout the 2001 - commercial salmon fishing season in the coastal waters of southern British Columbia. Neither the seine net, nor the troll salmon fisheries reported entanglements in 2001. All observer reported entanglements of small cetaceans were phocoenids and all were caught in gill nets. In total, four porpoises were incidentally caught – each in a different statistical licensing area (licensing areas 12, 21, 25, 121). Two of these four (50%), were released alive. The two by-caught harbour porpoises that could not be released alive, died in the gill nets before either the observer or the vessel's crew were aware of the collision. When mitigative actions were effected, live release resulted. At a minimum, the porpoises sustained superficial lacerations from the rescue efforts and the gill net collision. Morphometric and scan zone data indicated that the by-caught harbour porpoise were likely solitary juveniles. A total of 979 gill and seine net license holders were sent a questionnaire regarding their knowledge and experiences with harbour porpoise. Of these, 27.6% returned their completed questionnaires: 250 were used in the final analysis. Respondents had an average of 33.5 years fishing experience, with two-thirds of them reporting a multi-gear career. Respondents expressed a keen willingness to participate and provided details of their harbour porpoise experiences, as well as information about other small cetacean encounters. Respondents reported a total of 14 incidents, involving 19 harbour porpoise incidentally caught between 1997 and 2001. All were with gill nets and most involved single animals. The license holders reported a 52.6% overall release rate, with a 100% release rate for those found alive. Damage to gear was usually caused by the rescue efforts, rather than by the entangled porpoises. Human intervention was required, as none of the phocoenids were able to disentangle themselves. Porpoises appeared to respond well to human intervention and handling, as indicated by the few reports of mortality occurring during a rescue (ancillary reports prior to the 1997 - 2001 focus period). The license holder's responses indicated that most of the incidental catch events occurred in Salmon Statistical Licensing Areas 4, 8, 12, 21 and 22. Based on the number of by-caught porpoises reported through the observer program, the total theoretical mortality for southern BC (Statistical Areas D and E) is 20 animals per 810 boat days fished, or 80 porpoises for the 2001 fishing effort. Given that harbour porpoise accounted for all observer reported phocoenid mortality, this translates to an estimated mortality of 80 harbour porpoise for the 2001 effort. Poisson distribution 95% confidence levels determined annual phocoenid mortality between 11 and 102 animals for southern BC (Salmon Licensing Areas D and E). It is likely that the proportions of harbour to Dall's porpoise killed annually are variable based on differential overlap of gill net fisheries with phocoenid spatial and temporal distribution. This estimate was based on a very small sample size and assumed that catch rates were the same across all statistical areas. However, this assumption is questionable given that harbour porpoise and fishing effort have heterogeneous distributions. A second estimate derived from the province-wide career experiences of license holders (1997 - 2001) yielded an estimated incidental catch of 14.1 harbour porpoise per year, with an annual mortality of 6.6 animals and Poisson distribution 95% confidence levels of 23 - 61 porpoises killed annually. Our estimates suggest that fewer than 100 harbour porpoise are killed each year by commercial salmon gill net fisheries. However, the biological significance of our estimates of mortality is unknown due to a lack of information about numbers and rates of birth, and natural mortality of BC harbour porpoise. What we do know is that fishery caused mortality of harbour porpoise continues throughout the province, including trans-boundary areas with Washington State, even in times of reduced fishing effort. This has special significance for any populations that are at risk of gear entanglement in both US and Canadian waters, and to any populations, which are small or have restricted ranges. The fact that mortality occurs in a highly regulated fishery raises the possibility that considerably higher mortality may have occurred in times of more permissive fisheries. If so, reduced fishery related mortality today, may mean the recovery of harbor porpoise populations historically diminished by fisheries. This in turn, underlines the need for further monitoring in southern BC and implementation of standardized reporting of harbor porpoise by-catch from central and northern regions. Approximately half of the observer and license holder reported incidentally caught porpoises were released alive. This speaks well to the efforts of gill net fishermen in British Columbia. Further efforts to reduce harbor porpoise by-catch and increase live release rates must be practical to a commercial fishing situation and must consider the effects to the efficiency of the target species fisheries. A number of recommendations stem from our study to reduce incidental catch and increase live release rates. These include further investigation into selective gill net fishery modifications, improving observer training specific to marine mammals, rescue and release protocols and augmenting harbor porpoise biological research. Time or area restrictions and the introduction of acoustic net alarms do not appear to be appropriate management tools at this time, due to the uncertainty associated with the estimates of mortality, the lack of knowledge about harbor porpoise biology and the apparent rarity of occurrence per boat day fished or per respondent license holder.
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Cost of transport in Steller sea lions, Eumetopias jubatus.
Rosen, D.A.S. and A.W. Trites. 2002.
Marine Mammal Science 18:513-524.
abstract
The cost of swimming is a key component in the energy budgets of marine mammals. Unfortunately, data to derive predictive allometric equations are limited, and estimates exist for only one other species of otariid. Our study measured the oxygen consumption of three juvenile Steller sea lions (Eumetopias jubatus) swimming in a flume tank at velocities up to 2.2 m sec-1. Minimum measured cost of transport ranged from 3.5-5.3 J kg-1, m-1, and was reached at swimming speeds of 1.7-2.1 m s-1. These cost-of-transport values are higher than those reported for other marine mammals. However, once differences in stationary metabolic rate were accounted for, the locomotor costs (LC) for the Steller sea lions were commensurate with those of other marine mammals. Locomotor costs (LC in J m-1) appeared to be directly proportional to body mass (M in kg) such that LC = 1.651M1.01. These estimates for the cost of locomotion can be incorporated into bioenergetic models and used to determine the energetic consequences of observed swimming behavior in wild marine mammals.
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Changes in metabolism in response to fasting and food restriction in the Steller sea lion (Eumetopias jubatus).
Rosen, D.A.S. and A.W. Trites. 2002.
Comparative Biochemistry and Physiology. 132:389-399.
abstract
Many animals lower their resting metabolism (metabolic depression) when fasting or consuming inadequate food. We sought to document this response by subjecting five Steller sea lions to periods of: (1) complete fasting; or (2) restricting them to 50% of their normal herring diet. The sea lions lost an average of 1.5% of their initial body mass per day (2.30 kg y d )during the 9 –14-day fast, and their resting metabolic rates decreased 31%, which is typical of a ‘fasting response ’. However, metabolic depression did not occur during the 28-day food restriction trials,despite the loss of 0.30% of body mass per day (0.42 kg y d). This difference in response suggests that undernutrition caused by reduced food intake may stimulate a ‘hunger response ’, which in turn might lead to increased foraging effort. The progressive changes in metabolism we observed during the fasts were related to, but were not directly caused by, changes in body mass from control levels. Combining these results with data collected from experiments when Steller sea lions were losing mass on low energy squid and pollock diets reveals a strong relationship between relative changes in body mass and relative changes in resting metabolism across experimental conditions.While metabolic depression caused by fasting or consuming large amounts of low energy food reduced the direct costs from resting metabolism, it was insufficient to completely overcome the incurred energy deficit.
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What is it about food? Examining possible mechanisms with captive Steller sea lions.
Rosen, D.A.S. and A.W. Trites. 2002.
In D. DeMaster and S. Atkinson (eds), Steller sea lion decline: Is it food II. University of Alaska Sea Grant, AK-SG-02-02, Fairbanks. pp. 45-48.
abstract
Changes in the quality or quantity of food can have a dramatic effect on the population status of wild animals. Unfortunately, it is difficult to assess (or define) whether nutritional stress is a contributing factor to the decline of any particular species.The “nutritional quality ” of a diet to an animal is a complex matter to assess given the range of components that can influence its value.The effects of different diets on animal health are equally complex, and are particularly difficult to assess in large, wild animals. Research by the North Pacific Universities Marine Mammal Research Consortium with captive Steller sea lions is evaluating the possible mechanisms by which dietary changes might adversely affect the nutritional or health status of individual animals, and ultimately the population as a whole. The research investigates the three potential proximate mechanisms by which changes in diet might impact Steller sea lions:a decrease in energy intake, a decrease in the intake of some essential element, and the over-consumption of an element detrimental to sea lion health.
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